RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SNX11Q9Y5W9 270 aa25.14■■□□□ 1.61
LSM6-202ENST00000502781 SAR1BQ9Y6B6 198 aa25.14■■□□□ 1.61
LSM6-202ENST00000502781 A6NNZ2 444 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 IFNB1P01574 187 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 CHRNA4P43681 627 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 KCNJ1P48048 391 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 STC1P52823 247 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 C21orf59P57076 290 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 PFN3P60673 137 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 ACOX1Q15067 660 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 IRF4Q15306 451 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 CCDC70Q6NSX1 233 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 IL27RAQ6UWB1 636 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 OR13H1Q8NG92 308 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 DTD2Q96FN9 168 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 KLHDC7BQ96G42 594 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 AP1M1Q9BXS5 423 aa25.13■■□□□ 1.61
LSM6-202ENST00000502781 MAGEC1O60732 1142 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 CLDN7O95471 211 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 C1SP09871 688 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 SIRPB2Q5JXA9 342 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 NYAP1Q6ZVC0 841 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 Q6ZVL8 140 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 SPATS2Q86XZ4 545 aaKnown RBP25.12■■□□□ 1.61
LSM6-202ENST00000502781 CREG2Q8IUH2 290 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 EID2BQ96D98 161 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 SRPK1Q96SB4 655 aaKnown RBP25.12■■□□□ 1.61
LSM6-202ENST00000502781 FSD1LQ9BXM9 530 aa25.12■■□□□ 1.61
LSM6-202ENST00000502781 C1orf232A0A0U1RR37 186 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 TOR1BO14657 336 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 AGTP01019 485 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 FGF1P05230 155 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 THEGLP0DJG4 465 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 ETS1P14921 441 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 ETV3P41162 512 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 RABIFP47224 123 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 LIMK1P53667 647 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 ARHGAP8P85298 464 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 ZNF423Q2M1K9 1284 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 TTC27Q6P3X3 843 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 KDM7AQ6ZMT4 941 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 Q6ZSR6 202 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 PRUNE1Q86TP1 453 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 SLC22A18ASQ8N1D0 253 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 MINDY1Q8N5J2 469 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 CCDC89Q8N998 374 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 ATL2Q8NHH9 583 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 FICDQ9BVA6 458 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 ARNT2Q9HBZ2 717 aa25.11■■□□□ 1.61
LSM6-202ENST00000502781 DNAAF2Q9NVR5 837 aaKnown RBP25.11■■□□□ 1.61
LSM6-202ENST00000502781 PIRTP0C851 137 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 HLA-BQ31612 363 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 ESRP1Q6NXG1 681 aaKnown RBP25.1■■□□□ 1.61
LSM6-202ENST00000502781 ZNF765Q7L2R6 523 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 LYSMD3Q7Z3D4 306 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 NLRP8Q86W28 1048 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 DCP2Q8IU60 420 aaKnown RBP25.1■■□□□ 1.61
LSM6-202ENST00000502781 MAGOHBQ96A72 148 aaKnown RBP25.1■■□□□ 1.61
LSM6-202ENST00000502781 NUS1Q96E22 293 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 ERVMER34-1Q9H9K5 563 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 ZFYVE1Q9HBF4 777 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 TMEM9BQ9NQ34 198 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 PAK5Q9P286 719 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 ZNF711Q9Y462 761 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 SPO11Q9Y5K1 396 aa25.1■■□□□ 1.61
LSM6-202ENST00000502781 GOLGA6CA6NDK9 693 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 GOLGA6BA6NDN3 693 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 GOLGA6DP0CG33 693 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 RPL22P35268 128 aaKnown RBP25.09■■□□□ 1.61
LSM6-202ENST00000502781 ACTN2P35609 894 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 TRIM23P36406 574 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 FDFT1P37268 417 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 COILP38432 576 aaPredicted RBP25.09■■□□□ 1.61
LSM6-202ENST00000502781 TNNT3P45378 269 aaPredicted RBP25.09■■□□□ 1.61
LSM6-202ENST00000502781 YPEL5P62699 121 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 DPTQ07507 201 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 MSLNQ13421 630 aaPredicted RBP25.09■■□□□ 1.61
LSM6-202ENST00000502781 MTM1Q13496 603 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 OLIG2Q13516 323 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 FAXCQ5TGI0 409 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 DENND2CQ68D51 928 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 DENND5AQ6IQ26 1287 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 RFLNAQ6ZTI6 216 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 TMC3Q7Z5M5 1100 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 SLC25A41Q8N5S1 370 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 PLA2G15Q8NCC3 412 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 OR2I1PQ8NGU4 316 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 NETO1Q8TDF5 533 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 GTPBP2Q9BX10 602 aaKnown RBP25.09■■□□□ 1.61
LSM6-202ENST00000502781 TRABDQ9H4I3 376 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 GAREM1Q9H706 876 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 ETNK1Q9HBU6 452 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 GDF3Q9NR23 364 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 GOLGA6AQ9NYA3 693 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 CABIN1Q9Y6J0 2220 aa25.09■■□□□ 1.61
LSM6-202ENST00000502781 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.08■■□□□ 1.61
LSM6-202ENST00000502781 ERI2A8K979 691 aaKnown RBP25.08■■□□□ 1.61
LSM6-202ENST00000502781 PHF2O75151 1096 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 AP2A1O95782 977 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 CER1O95813 267 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms