RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CA4P22748 312 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 KELP23276 732 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 MSNP26038 577 aaKnown RBP15.36■□□□□ 0.05
NUP50-219ENST00000497960 HK3P52790 923 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 EPHB1P54762 984 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 SLC10A2Q12908 348 aaPredicted RBP15.36■□□□□ 0.05
NUP50-219ENST00000497960 C1orf61Q13536 156 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 ARHGEF7Q14155 803 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 DEFB133Q30KQ1 61 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 DENND2CQ68D51 928 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 MFSD7Q6UXD7 560 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 MARCH9Q86YJ5 346 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 HID1Q8IV36 788 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 FSTL5Q8N475 847 aaPredicted RBP15.36■□□□□ 0.05
NUP50-219ENST00000497960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
NUP50-219ENST00000497960 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
NUP50-219ENST00000497960 EXD1Q8NHP7 514 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 GLMNQ92990 594 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 SCRN2Q96FV2 425 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 WDR92Q96MX6 357 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 TCEAL2Q9H3H9 227 aaPredicted RBP15.36■□□□□ 0.05
NUP50-219ENST00000497960 KLQ9UEF7 1012 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 DOLKQ9UPQ8 538 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 HEY1Q9Y5J3 304 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 PLXNB3Q9ULL4 1909 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
NUP50-219ENST00000497960 APC2O95996 2303 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 TRABD2BA6NFA1 517 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 C3orf70A6NLC5 250 aaPredicted RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 LMO7DNF2Z398 122 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 PDE2AO00408 941 aaPredicted RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 DDX3YO15523 660 aaKnown RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 GCATO75600 419 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 HEXIM1O94992 359 aaKnown RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 ZRANB2O95218 330 aaKnown RBP eCLIP15.35■□□□□ 0.05
NUP50-219ENST00000497960 CETN2P41208 172 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 KIAA1024LP59773 190 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 SRP54P61011 504 aaKnown RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 DYNLT1P63172 113 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 DSC2Q02487 901 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 PDK1Q15118 436 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 ELOCQ15369 112 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 CNGA3Q16281 694 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 ALG11Q2TAA5 492 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 ZNF569Q5MCW4 686 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 SEL1L2Q5TEA6 688 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 KAZNQ674X7 775 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 SLC9A4Q6AI14 798 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 ALG1LQ6GMV1 187 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 RD3Q7Z3Z2 195 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 PLA2G15Q8NCC3 412 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 LRRN4Q8WUT4 740 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 PIH1D2Q8WWB5 315 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 SCG3Q8WXD2 468 aaKnown RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 ALG3Q92685 438 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 TSACCQ96A04 125 aaPredicted RBP15.35■□□□□ 0.05
NUP50-219ENST00000497960 NUS1Q96E22 293 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 HES6Q96HZ4 224 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 COQ10AQ96MF6 247 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 LGMNQ99538 433 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 LRRC61Q9BV99 259 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 WDR26Q9H7D7 661 aa15.35■□□□□ 0.05
NUP50-219ENST00000497960 NPIPB15A6NHN6 443 aaPredicted RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 PSMD11O00231 422 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 PPP1R12AO14974 1030 aaPredicted RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 TNFP01375 233 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 JCHAINP01591 159 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 HLA-DQB2P05538 268 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 GP1BAP07359 652 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 HOXC4P09017 264 aaPredicted RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 ALPIP09923 528 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 MYF5P13349 255 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 TSHRP16473 764 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 CTPS1P17812 591 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 CDKN2BP42772 138 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 RPIAP49247 311 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 CLDN6P56747 220 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 PPIDQ08752 370 aaKnown RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 AP1B1Q10567 949 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 NR0B2Q15466 257 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 PPP2R5EQ16537 467 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 TFDP3Q5H9I0 405 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 MEI1Q5TIA1 1274 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 ESRP1Q6NXG1 681 aaKnown RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 PNCKQ6P2M8 343 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 SLC35F6Q8N357 371 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 C17orf53Q8N3J3 647 aaPredicted RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 MCCC1Q96RQ3 725 aaPredicted RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 ABCG4Q9H172 646 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
NUP50-219ENST00000497960 CLCA2Q9UQC9 943 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 PPIL1Q9Y3C6 166 aa15.34■□□□□ 0.05
NUP50-219ENST00000497960 hCG_1818297A0A087WSY0 165 aa15.33■□□□□ 0.04
NUP50-219ENST00000497960 CPED1A4D0V7 1026 aa15.33■□□□□ 0.04
NUP50-219ENST00000497960 KCNK1O00180 336 aa15.33■□□□□ 0.04
NUP50-219ENST00000497960 YY2O15391 372 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms