RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ATP5F1P24539 256 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 HOXD9P28356 352 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 AVPR1AP37288 418 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CHRNA4P43681 627 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 GRIA4P48058 902 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 ARCN1P48444 511 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 TTPAP49638 278 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 RPS24P62847 133 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 ELF3P78545 371 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 ACVR1Q04771 509 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 FPGSQ05932 587 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 RAD51Q06609 339 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 SLC20A2Q08357 652 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CTBP1Q13363 440 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 RIPK1Q13546 671 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 ACAP2Q15057 778 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 FAM182AQ5T1J6 154 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 MPP7Q5T2T1 576 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 FBXW10Q5XX13 1052 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 SEL1L3Q68CR1 1132 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 ZCCHC23Q6ZST2 131 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 C16orf59Q7L2K0 433 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 PIWIL4Q7Z3Z4 852 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 PTAR1Q7Z6K3 402 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 CLEC14AQ86T13 490 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CILP2Q8IUL8 1156 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 DENND6AQ8IWF6 608 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 TDRD5Q8NAT2 981 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 LPCAT1Q8NF37 534 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 GPR150Q8NGU9 434 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 OR4L1Q8NH43 312 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 ARRDC2Q8TBH0 407 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 DIS3LQ8TF46 1054 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 DDI1Q8WTU0 396 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 KCTD4Q8WVF5 259 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 HDAC10Q969S8 669 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 TADA1Q96BN2 335 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 PRICKLE1Q96MT3 831 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 TCF12Q99081 682 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 VN1R3Q9BXE9 311 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 TDRD1Q9BXT4 1180 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 CDH19Q9H159 772 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 MMADHCQ9H3L0 296 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 CAB39LQ9H9S4 337 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 RC3H2Q9HBD1 1191 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 PFDN4Q9NQP4 134 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 FBXO6Q9NRD1 293 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 NLE1Q9NVX2 485 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 SMPD4Q9NXE4 827 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 KIAA1522Q9P206 1035 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 XPR1Q9UBH6 696 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 ZNF212Q9UDV6 495 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 MARCOQ9UEW3 520 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 TAGLN3Q9UI15 199 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 HAO1Q9UJM8 370 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 EMCNQ9ULC0 261 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 SLC8A2Q9UPR5 921 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 LZTS1Q9Y250 596 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 RAP2CQ9Y3L5 183 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 PKP3Q9Y446 797 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 CPQQ9Y646 472 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 KIAA0100Q14667 2235 aaKnown RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 TTC28Q96AY4 2481 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 PIEZO1Q92508 2521 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 PLXNA2O75051 1894 aa6.94□□□□□ -1.3
USP39-219ENST00000496047 KIF26AQ9ULI4 1882 aaPredicted RBP6.94□□□□□ -1.3
USP39-219ENST00000496047 RANBP2P49792 3224 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 A0A0D9SEW6 157 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 UBA6A0AVT1 1052 aaPredicted RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 C2orf78A6NCI8 922 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 MROH6A6NGR9 719 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 SYCE1LA8MT33 242 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 E5RI56 91 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 GIPC1O14908 333 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 STX7O15400 261 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 CD3EAPO15446 510 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 TEX28O15482 410 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 PHGDHO43175 533 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 WIPF1O43516 503 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 DIAPH2O60879 1101 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 SOCS5O75159 536 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 VPS26AO75436 327 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 TMCC1O94876 653 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 ATP6V1G2O95670 118 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 CXCL14O95715 111 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 OLFM2O95897 454 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 F11P03951 625 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 ATXN1LP0C7T5 689 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 SLC35E2BP0CK96 405 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 ALOX15P16050 662 aaPredicted RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 EN2P19622 333 aaPredicted RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 PRDX6P30041 224 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 CTNNB1P35222 781 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 DNAJB13P59910 316 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 RPL26P61254 145 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 SLC7A9P82251 487 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 IRF9Q00978 393 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 UBE3AQ05086 875 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms