RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZNF30P17039 623 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 RPL26P61254 145 aaKnown RBP24.25■■□□□ 1.47
HLA-C-209ENST00000495835 GUSBP11Q6P575 273 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 NLRP8Q86W28 1048 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 ARL10Q8N8L6 244 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 RAPGEF5Q92565 580 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 DTD2Q96FN9 168 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 DTLQ9NZJ0 730 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 PADI4Q9UM07 663 aa24.25■■□□□ 1.47
HLA-C-209ENST00000495835 RPL26L1Q9UNX3 145 aaKnown RBP24.25■■□□□ 1.47
HLA-C-209ENST00000495835 NBEAQ8NFP9 2946 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 ADAMTS20P59510 1910 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 ITPR1Q14643 2758 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 TMEM202A6NGA9 273 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 MYCLP1P12525 358 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-209ENST00000495835 ZFXP17010 805 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-209ENST00000495835 GBE1Q04446 702 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 DPTQ07507 201 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 SLC9A4Q6AI14 798 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 RD3Q7Z3Z2 195 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 CCDC13Q8IYE1 715 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 LSMEM2Q8N112 164 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 TEX101Q9BY14 249 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 TRIM5Q9C035 493 aa24.24■■□□□ 1.47
HLA-C-209ENST00000495835 PHPT1Q9NRX4 125 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-209ENST00000495835 DDX56Q9NY93 547 aaKnown RBP24.24■■□□□ 1.47
HLA-C-209ENST00000495835 LRRD1A4D1F6 860 aa24.23■■□□□ 1.47
HLA-C-209ENST00000495835 NPIPB15A6NHN6 443 aaPredicted RBP24.23■■□□□ 1.47
HLA-C-209ENST00000495835 LHCGRP22888 699 aa24.23■■□□□ 1.47
HLA-C-209ENST00000495835 HADHBP55084 474 aaKnown RBP24.23■■□□□ 1.47
HLA-C-209ENST00000495835 PPIDQ08752 370 aaKnown RBP24.23■■□□□ 1.47
HLA-C-209ENST00000495835 SLC10A2Q12908 348 aaPredicted RBP24.23■■□□□ 1.47
HLA-C-209ENST00000495835 RHOT1Q8IXI2 618 aa24.23■■□□□ 1.47
HLA-C-209ENST00000495835 CCNYQ8ND76 341 aa24.23■■□□□ 1.47
HLA-C-209ENST00000495835 OR1E3Q8WZA6 343 aa24.23■■□□□ 1.47
HLA-C-209ENST00000495835 MAK16Q9BXY0 300 aaKnown RBP24.23■■□□□ 1.47
HLA-C-209ENST00000495835 BRD8Q9H0E9 1235 aa24.23■■□□□ 1.47
HLA-C-209ENST00000495835 A0A0J9YYE9 177 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 C3orf70A6NLC5 250 aaPredicted RBP24.22■■□□□ 1.47
HLA-C-209ENST00000495835 TRBC1P01850 177 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 PYGLP06737 847 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 PDHA1P08559 390 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 TGM2P21980 687 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 OGFOD3Q6PK18 319 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 TECPR1Q7Z6L1 1165 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 PLD5Q8N7P1 536 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 ARRDC2Q8TBH0 407 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.22■■□□□ 1.47
HLA-C-209ENST00000495835 PDXPQ96GD0 296 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 TDRD1Q9BXT4 1180 aaKnown RBP24.22■■□□□ 1.47
HLA-C-209ENST00000495835 FGF22Q9HCT0 170 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 GPR34Q9UPC5 381 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 LHX6Q9UPM6 363 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 RP1P56715 2156 aa24.22■■□□□ 1.47
HLA-C-209ENST00000495835 CSO75390 466 aaKnown RBP24.21■■□□□ 1.47
HLA-C-209ENST00000495835 LCA5LO95447 670 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 ACTN2P35609 894 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 ETV3P41162 512 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 EPHB1P54762 984 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 IFI35P80217 286 aaPredicted RBP24.21■■□□□ 1.47
HLA-C-209ENST00000495835 ISXQ2M1V0 245 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 ODF2Q5BJF6 829 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 ZNF765Q7L2R6 523 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 HSD11B1LQ7Z5J1 315 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 CCDC170Q8IYT3 715 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 TC2NQ8N9U0 490 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 SNIP1Q8TAD8 396 aaKnown RBP24.21■■□□□ 1.47
HLA-C-209ENST00000495835 LYSMD1Q96S90 227 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 LGR4Q9BXB1 951 aa24.21■■□□□ 1.47
HLA-C-209ENST00000495835 APOL1O14791 398 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 DXOO77932 396 aaKnown RBP24.2■■□□□ 1.46
HLA-C-209ENST00000495835 MAP3K6O95382 1288 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 CELA2BP08218 269 aaPredicted RBP24.2■■□□□ 1.46
HLA-C-209ENST00000495835 LSSP48449 732 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 DSC2Q02487 901 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 PDK1Q15118 436 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 PERM1Q5SV97 790 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 CRTC1Q6UUV9 634 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 RBM44Q6ZP01 1051 aaKnown RBP24.2■■□□□ 1.46
HLA-C-209ENST00000495835 Q6ZVL8 140 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 BZW1Q7L1Q6 419 aaKnown RBP24.2■■□□□ 1.46
HLA-C-209ENST00000495835 NRSN1Q8IZ57 195 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 GPR156Q8NFN8 814 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 FGF11Q92914 225 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 GULP1Q9UBP9 304 aa24.2■■□□□ 1.46
HLA-C-209ENST00000495835 PRSS38A1L453 326 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 USP12O75317 370 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 HLA-DQB2P05538 268 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 PNLIPP16233 465 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 EIF2S3P41091 472 aaKnown RBP24.19■■□□□ 1.46
HLA-C-209ENST00000495835 PTSQ03393 145 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 PEX6Q13608 980 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 DENND2CQ68D51 928 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 IGF2-ASQ6U949 168 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 TAF8Q7Z7C8 310 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 TSPAN33Q86UF1 283 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 HEATR4Q86WZ0 1026 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 PELI3Q8N2H9 469 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 ZNF578Q96N58 590 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-209ENST00000495835 CCDC3Q9BQI4 270 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms