RNA–Protein interactions for RNA: ENST00000494966.1

NIPSNAP1-205, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-205ENST00000494966 TRIM23P36406 574 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 EIF2S3P41091 472 aaKnown RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ETV3P41162 512 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TAS2R40P59535 323 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 GABREP78334 506 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MESDQ14696 234 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ISXQ2M1V0 245 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 KCTD16Q68DU8 428 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LSMEM2Q8N112 164 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 NDUFAF2Q8N183 169 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 KYQ8NBH2 561 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SNIP1Q8TAD8 396 aaKnown RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 FAF2Q96CS3 445 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SCRN2Q96FV2 425 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MCCC1Q96RQ3 725 aaPredicted RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RBM15Q96T37 977 aaKnown RBP eCLIP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MRPL40Q9NQ50 206 aaKnown RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 GOLGA6AQ9NYA3 693 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MOSPD1Q9UJG1 213 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ATRXP46100 2492 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PSMD11O00231 422 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MFAP3LO75121 409 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MYCLP1P12525 358 aaPredicted RBP12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CCNB1P14635 433 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CTPS1P17812 591 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CA4P22748 312 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CES1P23141 567 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CCNCP24863 283 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LSSP48449 732 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 EPHB1P54762 984 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 GBE1Q04446 702 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SPIDRQ14159 915 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 HSD11B1LQ7Z5J1 315 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TAF8Q7Z7C8 310 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 HEATR4Q86WZ0 1026 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PELI3Q8N2H9 469 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CCNYQ8ND76 341 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 FAM46DQ8NEK8 389 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SLC35G2Q8TBE7 412 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MAML1Q92585 1016 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 FATE1Q969F0 183 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CCDC74AQ96AQ1 378 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 DTD2Q96FN9 168 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LGR4Q9BXB1 951 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 POLR1BQ9H9Y6 1135 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CYP4F12Q9HCS2 524 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PHPT1Q9NRX4 125 aaPredicted RBP12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SPTLC3Q9NUV7 552 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RBM22Q9NW64 420 aaKnown RBP eCLIP12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 AMACRQ9UHK6 382 aa12.51□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LRP4O75096 1905 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RP1P56715 2156 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MGAQ8IWI9 3026 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PRSS38A1L453 326 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LRRD1A4D1F6 860 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PDHA1P08559 390 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 KDELR1P24390 212 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ITPKBP27987 946 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ARHGAP25P42331 645 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 DSC2Q02487 901 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PTPRRQ15256 657 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 C3orf38Q5JPI3 329 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ALG1LQ6GMV1 187 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RAET1GQ6H3X3 334 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 Q6ZVL8 140 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TSPAN33Q86UF1 283 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CNGA4Q8IV77 575 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PQLC3Q8N755 202 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 OR6C4Q8NGE1 309 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PIH1D2Q8WWB5 315 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RAPGEF5Q92565 580 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ATXN7L3BQ96GX2 97 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ZNF578Q96N58 590 aaPredicted RBP12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TSGA13Q96PP4 275 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CHP1Q99653 195 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 ANP32EQ9BTT0 268 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TMEM168Q9H0V1 697 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SUDS3Q9H7L9 328 aaPredicted RBP12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CARS2Q9HA77 564 aaKnown RBP12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
NIPSNAP1-205ENST00000494966 A0A0J9YYE9 177 aa12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 B4DGG1 531 aa12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CASC3O15234 703 aaKnown RBP12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 FZD6O60353 706 aa12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 DXOO77932 396 aaKnown RBP12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TRBC1P01850 177 aa12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 RBMS1P29558 406 aaKnown RBP12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 PCBP4P57723 403 aaKnown RBP12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CDK3Q00526 305 aa12.49□□□□□ -0.41
NIPSNAP1-205ENST00000494966 CCDC173Q0VFZ6 552 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms