RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 EID2BQ96D98 161 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 MOCOSQ96EN8 888 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 PNPOQ9NVS9 261 aa16.54■□□□□ 0.24
ATG4B-225ENST00000494465 TMEM114B3SHH9 223 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 HTRA2O43464 458 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 DLX3O60479 287 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 XYLBO75191 536 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 SLC4A1P02730 911 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 FDXRP22570 491 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 FUT11Q495W5 492 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 FAM45BPQ6NSW5 357 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 CCDC91Q7Z6B0 441 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 ALYREFQ86V81 257 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 PIM3Q86V86 326 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 TTC8Q8TAM2 541 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 FAM45AQ8TCE6 357 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 RPL10LQ96L21 214 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 MRPL57Q9BQC6 102 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 MRPL46Q9H2W6 279 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 GPAMQ9HCL2 828 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 CORO1CQ9ULV4 474 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 TRIM33Q9UPN9 1127 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 CXorf51AA0A1B0GTR3 108 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 ZNF195O14628 629 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 H2AFYO75367 372 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 PIGNO95427 931 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 SRCP12931 536 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 GKP32189 559 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 GRIA4P48058 902 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 STK19P49842 368 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 CDKN1CP49918 316 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 SLC20A2Q08357 652 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 USP4Q13107 963 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 TECRLQ5HYJ1 363 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 TTC7BQ86TV6 843 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 MYO19Q96H55 970 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 EBF4Q9BQW3 602 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 TNKS2Q9H2K2 1166 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 TLE6Q9H808 572 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 INTS10Q9NVR2 710 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 ZDHHC7Q9NXF8 308 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 FKBPLQ9UIM3 349 aa16.53■□□□□ 0.24
ATG4B-225ENST00000494465 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
ATG4B-225ENST00000494465 CBX6O95503 412 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 CCDC166P0CW27 439 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 ALOX15P16050 662 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-225ENST00000494465 TARSP26639 723 aaKnown RBP16.52■□□□□ 0.24
ATG4B-225ENST00000494465 SUOXP51687 545 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 ILF2Q12905 390 aaKnown RBP16.52■□□□□ 0.24
ATG4B-225ENST00000494465 PEX6Q13608 980 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 ARMC12Q5T9G4 340 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 ADGRD2Q7Z7M1 963 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 SDCCAG8Q86SQ7 713 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-225ENST00000494465 WDR75Q8IWA0 830 aaKnown RBP16.52■□□□□ 0.24
ATG4B-225ENST00000494465 PPP4R1Q8TF05 950 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 LPGAT1Q92604 370 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 IRF7Q92985 503 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-225ENST00000494465 SIKE1Q9BRV8 207 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 MAGEE1Q9HCI5 957 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 BPIFA1Q9NP55 256 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 ACSS2Q9NR19 701 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 HACD3Q9P035 362 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 HS3ST2Q9Y278 367 aa16.52■□□□□ 0.24
ATG4B-225ENST00000494465 NEDD8-MDP1E9PL57 170 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 H0YHG0 523 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 H7C0S8 307 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 ALPIP09923 528 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 LTA4HP09960 611 aaKnown RBP16.52■□□□□ 0.23
ATG4B-225ENST00000494465 CEBPBP17676 345 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 CTPS1P17812 591 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 TUBB3Q13509 450 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 FAM83EQ2M2I3 478 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 METTL3Q86U44 580 aaKnown RBP16.52■□□□□ 0.23
ATG4B-225ENST00000494465 PIANPQ8IYJ0 282 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 SCG3Q8WXD2 468 aaKnown RBP16.52■□□□□ 0.23
ATG4B-225ENST00000494465 AARSD1Q9BTE6 412 aaKnown RBP16.52■□□□□ 0.23
ATG4B-225ENST00000494465 NMUR2Q9GZQ4 415 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 WWP1Q9H0M0 922 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 ZNF106Q9H2Y7 1883 aaKnown RBP16.52■□□□□ 0.23
ATG4B-225ENST00000494465 SLC40A1Q9NP59 571 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 SPHK2Q9NRA0 654 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 TXLNGQ9NUQ3 528 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 IL17CQ9P0M4 197 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 MED16Q9Y2X0 877 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 ZNF711Q9Y462 761 aa16.52■□□□□ 0.23
ATG4B-225ENST00000494465 NUP210Q8TEM1 1887 aaPredicted RBP16.52■□□□□ 0.23
ATG4B-225ENST00000494465 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 FCHO1O14526 889 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 RASSF9O75901 435 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 POU2F2P09086 479 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 PMLP29590 882 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 PRKAA2P54646 552 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 KCNJ2P63252 427 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 AGAP9Q5VTM2 703 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 FAM91A1Q658Y4 838 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 PSAPL1Q6NUJ1 521 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 RBM23Q86U06 439 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 ZNF781Q8N8C0 355 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms