RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TPP1O14773 563 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 LCA5LO95447 670 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 JCHAINP01591 159 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 KRT7P08729 469 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 COMTP21964 271 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 NOP2P46087 812 aaKnown RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 MARCKSL1P49006 195 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 PTSQ03393 145 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 COL28A1Q2UY09 1125 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 ESRP1Q6NXG1 681 aaKnown RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 ZCCHC8Q6NZY4 707 aaKnown RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 MFSD7Q6UXD7 560 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 EFL1Q7Z2Z2 1120 aaKnown RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 FATE1Q969F0 183 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 HDAC11Q96DB2 347 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 WDR92Q96MX6 357 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 AGAP2Q99490 1192 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 IL12RB2Q99665 862 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 C1QTNF7Q9BXJ2 289 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 BRD8Q9H0E9 1235 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 TMEM168Q9H0V1 697 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 DKK4Q9UBT3 224 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 CD84Q9UIB8 345 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 CLCA2Q9UQC9 943 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 PCYT1BQ9Y5K3 369 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-212ENST00000493940 DUSP10Q9Y6W6 482 aa12.62□□□□□ -0.39
HSPG2-212ENST00000493940 TOR1BO14657 336 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 CEACAM5P06731 702 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 ALPPL2P10696 532 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 KRT10P13645 584 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 ARHGAP25P42331 645 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 MAGEA1P43355 309 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 POLD2P49005 469 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 ZNF75DP51815 510 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 SKOR1P84550 965 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 RTP5Q14D33 572 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 TAZQ16635 292 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
HSPG2-212ENST00000493940 ARMC12Q5T9G4 340 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 CNGA4Q8IV77 575 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 RHOT2Q8IXI1 618 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 KYQ8NBH2 561 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 CCNYQ8ND76 341 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 BTN2A2Q8WVV5 523 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 SCAMP4Q969E2 229 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 EID2BQ96D98 161 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 DTD2Q96FN9 168 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 TBATAQ96M53 351 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 OLFM3Q96PB7 478 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 HERPUD2Q9BSE4 406 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 TEX101Q9BY14 249 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 SLC13A1Q9BZW2 595 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 SIRPGQ9P1W8 387 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 GULP1Q9UBP9 304 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 KLQ9UEF7 1012 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 REXO2Q9Y3B8 237 aaKnown RBP12.61□□□□□ -0.39
HSPG2-212ENST00000493940 PLEKHM1Q9Y4G2 1056 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 HEY1Q9Y5J3 304 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 ALG6Q9Y672 507 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 DGKBQ9Y6T7 804 aa12.61□□□□□ -0.39
HSPG2-212ENST00000493940 A0A0J9YYE9 177 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 A0A0U1RQJ8 604 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 RASGRP1O95267 797 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 CLDN7O95471 211 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 TRBC1P01850 177 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 KRT1P04264 644 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 ANXA6P08133 673 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 HOXC4P09017 264 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 CDK4P11802 303 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 PECAM1P16284 738 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 CDKN2BP42772 138 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 PDX1P52945 283 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 KIAA1024LP59773 190 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 E2F1Q01094 437 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 PPIDQ08752 370 aaKnown RBP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 RALGPS1Q5JS13 557 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 LRRC66Q68CR7 880 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 MAP7D3Q8IWC1 876 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 CACTIN-AS1Q8N1I8 211 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 PAF1Q8N7H5 531 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 OR56A4Q8NGH8 313 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 TPCN2Q8NHX9 752 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 HNRNPLLQ8WVV9 542 aaKnown RBP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 NUS1Q96E22 293 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 RBM15Q96T37 977 aaKnown RBP eCLIP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 TDRD1Q9BXT4 1180 aaKnown RBP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 POLR1EQ9GZS1 481 aaKnown RBP12.6□□□□□ -0.39
HSPG2-212ENST00000493940 CYP4F12Q9HCS2 524 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 INTUQ9ULD6 942 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 PADI4Q9UM07 663 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms