RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SPATA24Q86W54 205 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 PDSS2Q86YH6 399 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 LPCAT1Q8NF37 534 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 RP9Q8TA86 221 aaKnown RBP12.46□□□□□ -0.41
HMGN1-220ENST00000492280 GATA6Q92908 595 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 MFSD1Q9H3U5 465 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 SCOCQ9UIL1 159 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 PCDHB7Q9Y5E2 793 aa12.46□□□□□ -0.41
HMGN1-220ENST00000492280 DNAH14Q0VDD8 3507 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 E7ENX8 843 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 FBP2O00757 339 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 PRAMEF11O60813 436 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.42
HMGN1-220ENST00000492280 GLP2RO95838 553 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 PMLP29590 882 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 OR1D2P34982 312 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 SH3BP2P78314 561 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 IL10RBQ08334 325 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 PDAP1Q13442 181 aaKnown RBP12.46□□□□□ -0.42
HMGN1-220ENST00000492280 PLA2G4EQ3MJ16 856 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 MMEL1Q495T6 779 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 METTL21CQ5VZV1 264 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 MDGA1Q8NFP4 955 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 CALML6Q8TD86 181 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 TRPC4APQ8TEL6 797 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 CNDP1Q96KN2 507 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 SARS2Q9NP81 518 aaKnown RBP12.46□□□□□ -0.42
HMGN1-220ENST00000492280 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 UTP6Q9NYH9 597 aaKnown RBP12.46□□□□□ -0.42
HMGN1-220ENST00000492280 STK39Q9UEW8 545 aa12.46□□□□□ -0.42
HMGN1-220ENST00000492280 LOC285095A0A1B0GVY8 99 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 C2orf78A6NCI8 922 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 SLC38A8A6NNN8 435 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 IQCF5A8MTL0 148 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 NPHS1O60500 1241 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PQBP1O60828 265 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 ALDH2P05091 517 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 INHAP05111 366 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 ALDOCP09972 364 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 CD1DP15813 335 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PRDX3P30048 256 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 HTR7P34969 479 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 NRG1Q02297 640 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PTK2BQ14289 1009 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 FASTKQ14296 549 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 UNC50Q53HI1 259 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 GALNT4Q8N4A0 578 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 TEX26Q8N6G2 289 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 CEP70Q8NHQ1 597 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 AUTS2Q8WXX7 1259 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 HBEGFQ99075 208 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 SEMA4BQ9NPR2 832 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 LRFN2Q9ULH4 789 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 TRAF6Q9Y4K3 522 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 TIMM22Q9Y584 194 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 MYOFQ9NZM1 2061 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 CHD5Q8TDI0 1954 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 SYN3O14994 580 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 UBDO15205 165 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 INPPL1O15357 1258 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 SLC7A4O43246 635 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 GFAPP14136 432 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 ZNF37AP17032 561 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PRDX6P30041 224 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 AGTR2P50052 363 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 FAM189BP81408 668 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 SEMG2Q02383 582 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 GNA12Q03113 381 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 GPR17Q13304 367 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 ZRSR2Q15696 482 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PAQR3Q6TCH7 311 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 C16orf89Q6UX73 402 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 KIAA0408Q6ZU52 694 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PIANPQ8IYJ0 282 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 RPL10LQ96L21 214 aaKnown RBP12.45□□□□□ -0.42
HMGN1-220ENST00000492280 KLHL4Q9C0H6 718 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 PDFQ9HBH1 243 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 MID1IP1Q9NPA3 183 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 CATSPERZQ9NTU4 200 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 ASB1Q9Y576 335 aa12.45□□□□□ -0.42
HMGN1-220ENST00000492280 CDC7O00311 574 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 LIN7AO14910 233 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-220ENST00000492280 NIPSNAP2O75323 286 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 IGLV3-27P01718 113 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 GALTP07902 379 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 SERPINF2P08697 491 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 CES1P23141 567 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PLD1Q13393 1074 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 GRB7Q14451 532 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 TSNQ15631 228 aaKnown RBP12.44□□□□□ -0.42
HMGN1-220ENST00000492280 CMPK2Q5EBM0 449 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 ZNF678Q5SXM1 525 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 REP15Q6BDI9 236 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 GLT6D1Q7Z4J2 308 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 DDIASQ8IXT1 998 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PELI3Q8N2H9 469 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms