RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 DCLRE1BQ9H816 532 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SSU72Q9NP77 194 aaKnown RBP9.48□□□□□ -0.89
BRCA1-219ENST00000491747 SEMA4GQ9NTN9 838 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 LNPEPQ9UIQ6 1025 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ZFP69BQ9UJL9 534 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 PPM1HQ9ULR3 514 aa9.48□□□□□ -0.89
BRCA1-219ENST00000491747 ANKRD36A6QL64 1941 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 DMXL1Q9Y485 3027 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 PATE3B3GLJ2 98 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 TYROBPO43914 113 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 IL1BP01584 269 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 T-ENOLP0DO92 83 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 PECAM1P16284 738 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-219ENST00000491747 MAOBP27338 520 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 ETFBP38117 255 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 MPLP40238 635 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 PEX19P40855 299 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 PAPOLAP51003 745 aaKnown RBP9.47□□□□□ -0.89
BRCA1-219ENST00000491747 NDST2P52849 883 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 CDH6P55285 790 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 ZBTB16Q05516 673 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF33AQ06730 810 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 SF3A2Q15428 464 aaKnown RBP9.47□□□□□ -0.89
BRCA1-219ENST00000491747 TAF1BQ53T94 588 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-219ENST00000491747 TCEAL6Q6IPX3 200 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 DPY19L3Q6ZPD9 716 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 NLRP9Q7RTR0 991 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 ZBED8Q8IZ13 594 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 OR8D1Q8WZ84 308 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 TCEAL3Q969E4 200 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 C6orf106Q9H6K1 298 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-219ENST00000491747 PDFQ9HBH1 243 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 RXFP3Q9NSD7 469 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 FBXL12Q9NXK8 326 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 SHOC2Q9UQ13 582 aa9.47□□□□□ -0.89
BRCA1-219ENST00000491747 H3BRJ5 948 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 ALOX15BO15296 676 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 RNASEH1O60930 286 aaKnown RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 NDUFS2O75306 463 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 CBX6O95503 412 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 ACADSP16219 412 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 OXTRP30559 389 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 GKP32189 559 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 PHBP35232 272 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 PTDSS1P48651 473 aaKnown RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 GPS1Q13098 491 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 DPYSL3Q14195 570 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 CYTH1Q15438 398 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 HADHQ16836 314 aaKnown RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 PARP15Q460N3 678 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 LVRNQ6Q4G3 990 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 OTOAQ7RTW8 1153 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF354CQ86Y25 554 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 HDDC3Q8N4P3 179 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 PIP4K2CQ8TBX8 421 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF483Q8TF39 744 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 PIGKQ92643 395 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF75CPQ92670 426 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 HSPA12BQ96MM6 686 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 TUBB6Q9BUF5 446 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 TM6SF2Q9BZW4 377 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 CEP44Q9C0F1 390 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 STOML1Q9UBI4 398 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 FETUBQ9UGM5 382 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 DNPEPQ9ULA0 475 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 GRID1Q9ULK0 1009 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 SLCO1B1Q9Y6L6 691 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 FAM186AA6NE01 2351 aa9.46□□□□□ -0.89
BRCA1-219ENST00000491747 EP300Q09472 2414 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 RIF1Q5UIP0 2472 aaKnown RBP9.46□□□□□ -0.89
BRCA1-219ENST00000491747 LRRD1A4D1F6 860 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 CCDC22O60826 627 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 RNASEH2AO75792 299 aaKnown RBP9.46□□□□□ -0.9
BRCA1-219ENST00000491747 GM2AP17900 193 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 KRT4P19013 534 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 C5AR1P21730 350 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 ARL4AP40617 200 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 GEMIN4P57678 1058 aaKnown RBP9.46□□□□□ -0.9
BRCA1-219ENST00000491747 FASTKD3Q14CZ7 662 aaKnown RBP9.46□□□□□ -0.9
BRCA1-219ENST00000491747 SLC1A5Q15758 541 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 CSRP2Q16527 193 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 CARD16Q5EG05 197 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 ARSIQ5FYB1 569 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 LYSMD4Q5XG99 296 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 KAZNQ674X7 775 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 USP30Q70CQ3 517 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 CLNKQ7Z7G1 428 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 PCGF5Q86SE9 256 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 PCDH20Q8N6Y1 951 aaKnown RBP9.46□□□□□ -0.9
BRCA1-219ENST00000491747 OR6K2Q8NGY2 324 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 DNAJC9Q8WXX5 260 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 ARRDC3Q96B67 414 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 DENND2DQ9H6A0 471 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-219ENST00000491747 PILRBQ9UKJ0 227 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 SCML1Q9UN30 329 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 DRG1Q9Y295 367 aaKnown RBP9.46□□□□□ -0.9
BRCA1-219ENST00000491747 PCDHGA5Q9Y5G8 931 aa9.46□□□□□ -0.9
BRCA1-219ENST00000491747 TP53BP1Q12888 1972 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms