RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GALNT2Q10471 571 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 NFATC4Q14934 902 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 PAFAH1B3Q15102 231 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 RPS6KA1Q15418 735 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 CDKN3Q16667 212 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 CFAP58Q5T655 872 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 SLC35F3Q8IY50 421 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 C17orf53Q8N3J3 647 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 ATPAF2Q8N5M1 289 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 RNF25Q96BH1 459 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 RBM41Q96IZ5 413 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 TBATAQ96M53 351 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 COQ10AQ96MF6 247 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 DUSP23Q9BVJ7 150 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 NRSN2Q9GZP1 204 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 SPASTQ9UBP0 616 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 PCDHA3Q9Y5H8 950 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 A0A0U1RQS6 177 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 A0A1W2PNU3 283 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 TMEM202A6NGA9 273 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 TLX3O43711 291 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 LZTS3O60299 673 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 SOCS5O75159 536 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 PCCBP05166 539 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 TGM2P21980 687 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 KDELR1P24390 212 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 MMP13P45452 471 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 HK3P52790 923 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 PPARDQ03181 441 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 GBE1Q04446 702 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 SLC10A2Q12908 348 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 MTM1Q13496 603 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 ZNF235Q14590 738 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 TCEA2Q15560 299 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 CNGA3Q16281 694 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 HID1Q8IV36 788 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 KATNAL2Q8IYT4 538 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 SLC35F6Q8N357 371 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 EXD1Q8NHP7 514 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 RAPGEF5Q92565 580 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 KRT35Q92764 455 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 NXPE2Q96DL1 559 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 PDXPQ96GD0 296 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 LGR4Q9BXB1 951 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 LHX6Q9UPM6 363 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 ATRXP46100 2492 aa12.72□□□□□ -0.37
SEC61A1-206ENST00000491668 CFAP46Q8IYW2 2715 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 A0A087WV48 116 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 CPED1A4D0V7 1026 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 EME2A4GXA9 379 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 NPIPB15A6NHN6 443 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 FZD6O60353 706 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 HEXIM1O94992 359 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 PGLSO95336 258 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 PDHA1P08559 390 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 ELFN1P0C7U0 828 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 TRIM23P36406 574 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 MARCKSL1P49006 195 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 SRP54P61011 504 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 POLR2LP62875 67 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 COL28A1Q2UY09 1125 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 FAM182AQ5T1J6 154 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 MARC1Q5VT66 337 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 CRTC1Q6UUV9 634 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 ENPP7Q6UWV6 458 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 EFL1Q7Z2Z2 1120 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 RD3Q7Z3Z2 195 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 HSD11B1LQ7Z5J1 315 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 RFX6Q8HWS3 928 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 SFTPA2Q8IWL1 248 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 PIH1D2Q8WWB5 315 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 OR1E3Q8WZA6 343 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 MAML1Q92585 1016 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 CRELD1Q96HD1 420 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms