RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ZNF669Q96BR6 464 aaPredicted RBP21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 EID2BQ96D98 161 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 FCRL3Q96P31 734 aaPredicted RBP21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 IER2Q9BTL4 223 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 LRFN3Q9BTN0 628 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 GPR63Q9BZJ6 419 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 TREX1Q9NSU2 369 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 ITM2BQ9Y287 266 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 ZCWPW2A0A1B0GU75 182 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 PAPSS2O95340 614 aaPredicted RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 CLDN7O95471 211 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 VIPR1P32241 457 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 HMGCLP35914 325 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 ZNF140P52738 457 aaPredicted RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 HMGB4Q8WW32 186 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 PEX13Q92968 403 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 RAB7BQ96AH8 199 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 OMDQ99983 421 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 VPS37BQ9H9H4 285 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 FBXL12Q9NXK8 326 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 SLC2A6Q9UGQ3 507 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 LRRK1Q38SD2 2015 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 AREL1O15033 823 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 SPAG6O75602 509 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 RNASEH2AO75792 299 aaKnown RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 TSHRP16473 764 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 LPOP22079 712 aaPredicted RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 PDE1BQ01064 536 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 ELP6Q0PNE2 266 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 RALGDSQ12967 914 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 TTC31Q49AM3 519 aaPredicted RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 SPANXN3Q5MJ09 141 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 SPDYCQ5MJ68 293 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 ESRP1Q6NXG1 681 aaKnown RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 KIAA1324Q6UXG2 1013 aaKnown RBP21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 MAMSTRQ6ZN01 415 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 DPPA4Q7L190 304 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 OR13J1Q8NGT2 312 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 GSDMBQ8TAX9 411 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 STYXQ8WUJ0 223 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 FAM131CQ96AQ9 280 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 GGT7Q9UJ14 662 aa21.76■■□□□ 1.07
VCPKMT-204ENST00000491402 ZNF30P17039 623 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 CCR3P51677 355 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 CCDC15Q0P6D6 951 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 ARHGEF7Q14155 803 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 SLC29A2Q14542 456 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 PTPRCAPQ14761 206 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 CNGA3Q16281 694 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 C1orf210Q8IVY1 113 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 OR4K2Q8NGD2 314 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 OR13C4Q8NGS5 318 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 DNAJC1Q96KC8 554 aaKnown RBP21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 HHIPQ96QV1 700 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 IL17CQ9P0M4 197 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 RIMKLBQ9ULI2 386 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 FAM169AQ9Y6X4 670 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 NUMA1Q14980 2115 aa21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 ZNF106Q9H2Y7 1883 aaKnown RBP21.75■■□□□ 1.07
VCPKMT-204ENST00000491402 TCRBV9S1A1TA0A576 114 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 GSTA2P09210 222 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 ACADMP11310 421 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 PTSQ03393 145 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 SKIDA1Q1XH10 827 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 ANO7Q6IWH7 933 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 TSTD1Q8NFU3 115 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 GANCQ8TET4 914 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 NLE1Q9NVX2 485 aaPredicted RBP21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 PKP3Q9Y446 797 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 FADS3Q9Y5Q0 445 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 LAMTOR5O43504 91 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 PHBP35232 272 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 TAS2R38P59533 333 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 ACVR1Q04771 509 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 TSSK4Q6SA08 328 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 USP30Q70CQ3 517 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 BPIFA1Q9NP55 256 aa21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 BCCIPQ9P287 314 aaKnown RBP eCLIP21.74■■□□□ 1.07
VCPKMT-204ENST00000491402 H0Y858 1186 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 CCL22O00626 93 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 NEMP1O14524 444 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 STX7O15400 261 aaKnown RBP21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 AP1G1O43747 822 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 ABHD2P08910 425 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 PAMP19021 973 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 TMPRSS15P98073 1019 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 KIAA0930Q6ICG6 404 aaPredicted RBP21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 TRMT10BQ6PF06 316 aaKnown RBP21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 KBTBD6Q86V97 674 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 UNC5BQ8IZJ1 945 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 UHMK1Q8TAS1 419 aaKnown RBP21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 MOCS1Q9NZB8 636 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 IL1RAPL1Q9NZN1 696 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 FZD4Q9ULV1 537 aa21.73■■□□□ 1.07
VCPKMT-204ENST00000491402 ALDH1A2O94788 518 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 C1SP09871 688 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 ELFN1P0C7U0 828 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 PSMA3P25788 255 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms