RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZNHIT6Q9NWK9 470 aaKnown RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 SIRPGQ9P1W8 387 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-219ENST00000491183 TNFRSF10CO14798 259 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 MFAP3LO75121 409 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 FUCA1P04066 466 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 CYP2A6P11509 494 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-219ENST00000491183 KDELR1P24390 212 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 ETV3P41162 512 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 DSC2Q02487 901 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 TBC1D25Q3MII6 688 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 ALG1LQ6GMV1 187 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 RFLNAQ6ZTI6 216 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 Q6ZVL8 140 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 GKN2Q86XP6 184 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 ARL10Q8N8L6 244 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 TPCN2Q8NHX9 752 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 SCG3Q8WXD2 468 aaKnown RBP18.01■□□□□ 0.47
HMGN1-219ENST00000491183 FATE1Q969F0 183 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 NUS1Q96E22 293 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 DTD2Q96FN9 168 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 RNF157Q96PX1 679 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 CCDC3Q9BQI4 270 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 TEX101Q9BY14 249 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 POLR1EQ9GZS1 481 aaKnown RBP18.01■□□□□ 0.47
HMGN1-219ENST00000491183 TMEM168Q9H0V1 697 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 WDR26Q9H7D7 661 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 NHEJ1Q9H9Q4 299 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-219ENST00000491183 RBM22Q9NW64 420 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■■□□□ 11.7
HMGN1-219ENST00000491183 LCMT1Q9UIC8 334 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 RABGEF1Q9UJ41 708 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 GPR34Q9UPC5 381 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 ENTPD2Q9Y5L3 495 aa18.01■□□□□ 0.47
HMGN1-219ENST00000491183 KELP23276 732 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 LSSP48449 732 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 GABREP78334 506 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 NIPAL4Q0D2K0 466 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 TSR1Q2NL82 804 aaKnown RBP18■□□□□ 0.47
HMGN1-219ENST00000491183 TIGD7Q6NT04 549 aaPredicted RBP18■□□□□ 0.47
HMGN1-219ENST00000491183 OGFOD3Q6PK18 319 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 TECPR1Q7Z6L1 1165 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 SFTPA2Q8IWL1 248 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18■□□□□ 0.47
HMGN1-219ENST00000491183 GPR156Q8NFN8 814 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 CCL4L1Q8NHW4 92 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 ARRDC2Q8TBH0 407 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 CYP4F12Q9HCS2 524 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 DTLQ9NZJ0 730 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 NBEAQ8NFP9 2946 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 ITPR1Q14643 2758 aa18■□□□□ 0.47
HMGN1-219ENST00000491183 PSMD11O00231 422 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 NTN3O00634 580 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-219ENST00000491183 MTA2O94776 668 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 PRLP01236 227 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 MYCLP1P12525 358 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-219ENST00000491183 CCNB1P14635 433 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 ACTN2P35609 894 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 TBX2Q13207 712 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-219ENST00000491183 RBM44Q6ZP01 1051 aaKnown RBP17.99■□□□□ 0.47
HMGN1-219ENST00000491183 USP45Q70EL2 814 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 TAF8Q7Z7C8 310 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 HEATR4Q86WZ0 1026 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 CCDC74AQ96AQ1 378 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 CCDC42Q96M95 316 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 POLR1BQ9H9Y6 1135 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 KCTD5Q9NXV2 234 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 AMACRQ9UHK6 382 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 MOSPD1Q9UJG1 213 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 CHKBQ9Y259 395 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 KIF26BQ2KJY2 2108 aa17.99■□□□□ 0.47
HMGN1-219ENST00000491183 A0A0J9YYE9 177 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PRSS38A1L453 326 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 C3orf70A6NLC5 250 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PDE2AO00408 941 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 TCEA3O75764 348 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 DXOO77932 396 aaKnown RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 TRBC1P01850 177 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 HLA-DQB2P05538 268 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 CEACAM5P06731 702 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 TPM1P09493 284 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 CES1P23141 567 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 NFKBIAP25963 317 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 ABCG1P45844 678 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PDX1P52945 283 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PTSQ03393 145 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 ARHGEF7Q14155 803 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 FAM182AQ5T1J6 154 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 ZFYVE27Q5T4F4 411 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PLD5Q8N7P1 536 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 FAM46DQ8NEK8 389 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PTCD2Q8WV60 388 aaKnown RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 HDAC11Q96DB2 347 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PRR11Q96HE9 360 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 FRMD8Q9BZ67 464 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 ABCG8Q9H221 673 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 PHPT1Q9NRX4 125 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 SATB2Q9UPW6 733 aa17.98■□□□□ 0.47
HMGN1-219ENST00000491183 ARHGEF17Q96PE2 2063 aaPredicted RBP17.98■□□□□ 0.47
HMGN1-219ENST00000491183 CACNA1GO43497 2377 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms