RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CTF1Q16619 201 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 ALG11Q2TAA5 492 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 AMZ1Q400G9 498 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 ZNF585BQ52M93 769 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 NADSYN1Q6IA69 706 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLC36A4Q6YBV0 504 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 MTSS1LQ765P7 747 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 TAOK1Q7L7X3 1001 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 HAPLN4Q86UW8 402 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 WDR63Q8IWG1 891 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 ADHFE1Q8IWW8 467 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 SPATA6LQ8N4H0 392 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 TMEM116Q8NCL8 245 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 CREB3L4Q8TEY5 395 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 MAP7D2Q96T17 732 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 SH3GL2Q99962 352 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 STRA6Q9BX79 667 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 C6orf106Q9H6K1 298 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 C17orf75Q9HAS0 396 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLC28A3Q9HAS3 691 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 MKKSQ9NPJ1 570 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 RRP7BPQ9NSQ0 103 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLC9A2Q9UBY0 812 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLCO3A1Q9UIG8 710 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 NFS1Q9Y697 457 aa4.94□□□□□ -1.62
HMGB1P38-201ENST00000490557 FAM237BA0A1B0GVD1 139 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 PAGE4O60829 102 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLC25A12O75746 678 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 BAIAP3O94812 1187 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 CYC1P08574 325 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 IGHV4-30-4P0DP06 118 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 SSTR2P30874 369 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 PPARGP37231 505 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 F2RL1P55085 397 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 GEMIN4P57678 1058 aaKnown RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 ARF3P61204 181 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 ARF1P84077 181 aaKnown RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 ECT2LQ008S8 904 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 BNC1Q01954 994 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 CSTF3Q12996 717 aaKnown RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 MYBPHQ13203 477 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 MED22Q15528 200 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 EFNB3Q15768 340 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 ASIC2Q16515 512 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 IZUMO4Q1ZYL8 232 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 C2orf68Q2NKX9 166 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 ATP13A5Q4VNC0 1218 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 SIGIRRQ6IA17 410 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 KCTD18Q6PI47 426 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 CRELD2Q6UXH1 353 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 KRBA2Q6ZNG9 492 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 POMGNT1Q8WZA1 660 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 MMABQ96EY8 250 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLC41A2Q96JW4 573 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 PPP1R3EQ9H7J1 279 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 LAS1LQ9Y4W2 734 aaKnown RBP4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 MAU2Q9Y6X3 613 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 ITIH6Q6UXX5 1313 aa4.93□□□□□ -1.62
HMGB1P38-201ENST00000490557 IGLV5-37A0A075B6J1 123 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 FAM237AA0A1B0GTK4 181 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 SOCS6O14544 535 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 SLC28A2O43868 658 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 NDUFS7O75251 213 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 TIPRLO75663 272 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 SCGB1D1O95968 90 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 RRM1P23921 792 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 TNFRSF8P28908 595 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 ART1P52961 327 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 TUBA1BP68363 451 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 MAMLD1Q13495 774 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 EIF2S3LQ2VIR3 472 aaKnown RBP4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 ANKRD54Q6NXT1 300 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 WDR73Q6P4I2 378 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 RHBDF2Q6PJF5 856 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 CYP20A1Q6UW02 462 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 C4orf50Q6ZRC1 276 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 PXKQ7Z7A4 578 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 ADSSL1Q8N142 457 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 PGBD5Q8N414 524 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 NEXN-AS1Q8NBZ9 246 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 ARHGEF2Q92974 986 aaKnown RBP4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 C3orf30Q96M34 536 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 TIGD1Q96MW7 591 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 PCGF1Q9BSM1 259 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 HAUS8Q9BT25 410 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 ESRP2Q9H6T0 727 aaKnown RBP4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 SH2D4AQ9H788 454 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 SCPEP1Q9HB40 452 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 NOX4Q9NPH5 578 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 MALT1Q9UDY8 824 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 PSAT1Q9Y617 370 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 PIAS3Q9Y6X2 628 aa4.92□□□□□ -1.62
HMGB1P38-201ENST00000490557 A0A0U1RQG5 324 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 PI4KAP2A4QPH2 592 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 PGPEP1LA6NFU8 196 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 F5H0A9 414 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 VCYO14598 125 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 ACOT8O14734 319 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 NDUFS3O75489 264 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 DDX58O95786 925 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms