RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 TRIM4Q9C037 500 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 SLC39A8Q9C0K1 460 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 NLRC4Q9NPP4 1024 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 SPATS2LQ9NUQ6 558 aaKnown RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 LRIT1Q9P2V4 623 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 KLQ9UEF7 1012 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PISDQ9UG56 409 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 NENFQ9UMX5 172 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 ATP8A1Q9Y2Q0 1164 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 LUC7L2Q9Y383 392 aaKnown RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 LOXL2Q9Y4K0 774 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 HECTD1Q9ULT8 2610 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 LRRC53A6NM62 1247 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 AKR1B15C9JRZ8 316 aaPredicted RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 NUDT21O43809 227 aaKnown RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 PRAMEF11O60813 436 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 PCCBP05166 539 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 FGF1P05230 155 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 FGF3P11487 239 aaPredicted RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 CCL4P13236 92 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 GPD1P21695 349 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 HTR1BP28222 390 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 CD1CP29017 333 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 SOX5P35711 763 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 ZNF143P52747 638 aaPredicted RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 NDST2P52849 883 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 KIAA1024LP59773 190 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 NSUN2Q08J23 767 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG5-205ENST00000489907 SQSTM1Q13501 440 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 TRIM14Q14142 442 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 GRM3Q14832 879 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 CA9Q16790 459 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 CLEC16AQ2KHT3 1053 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 COLEC12Q5KU26 742 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 PNCKQ6P2M8 343 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 BRAT1Q6PJG6 821 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 CYP4V2Q6ZWL3 525 aaPredicted RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 PRICKLE2Q7Z3G6 844 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 SRLQ86TD4 932 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 JAMLQ86YT9 394 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 TP53INP2Q8IXH6 220 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 SPC24Q8NBT2 197 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 MSANTD4Q8NCY6 345 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 C3orf20Q8ND61 904 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 FAM46DQ8NEK8 389 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 NKD1Q969G9 470 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 COQ10AQ96MF6 247 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 TUBGCP5Q96RT8 1024 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 CHP1Q99653 195 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 STRADBQ9C0K7 418 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 KCNF1Q9H3M0 494 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 SYNDIG1Q9H7V2 258 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 RDH14Q9HBH5 336 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 GEMIN8Q9NWZ8 242 aaKnown RBP8.17□□□□□ -1.1
SMG5-205ENST00000489907 DOLKQ9UPQ8 538 aa8.17□□□□□ -1.1
SMG5-205ENST00000489907 IGHV5-10-1A0A0J9YXX1 117 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CLEC18AA5D8T8 446 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 AGRPO00253 132 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 PPM1DO15297 605 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 PEX11BO96011 259 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CEACAM5P06731 702 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 JMJD7P0C870 316 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CCNB1P14635 433 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 STAT1P42224 750 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 PAPOLAP51003 745 aaKnown RBP8.16□□□□□ -1.1
SMG5-205ENST00000489907 AIF1P55008 147 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 OR1D5P58170 312 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CCZ1BP86790 482 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CCZ1P86791 482 aaPredicted RBP8.16□□□□□ -1.1
SMG5-205ENST00000489907 EFHC2Q5JST6 749 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CLEC18BQ6UXF7 455 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 TRIM72Q6ZMU5 477 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 ARHGAP36Q6ZRI8 547 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 ZNF571Q7Z3V5 609 aaPredicted RBP8.16□□□□□ -1.1
SMG5-205ENST00000489907 TAF8Q7Z7C8 310 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 LRRC8AQ8IWT6 810 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 NAGSQ8N159 534 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CLEC18CQ8NCF0 446 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 PATE1Q8WXA2 126 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
SMG5-205ENST00000489907 CMKLR1Q99788 373 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 NUDT22Q9BRQ3 303 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 TEX101Q9BY14 249 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 FAM117AQ9C073 453 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 DPEP2Q9H4A9 486 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 ABHD10Q9NUJ1 306 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 ADAM22Q9P0K1 906 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 PDP2Q9P2J9 529 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 UBA2Q9UBT2 640 aaPredicted RBP8.16□□□□□ -1.1
SMG5-205ENST00000489907 PCDHGA3Q9Y5H0 932 aa8.16□□□□□ -1.1
SMG5-205ENST00000489907 NAV2Q8IVL1 2488 aa8.15□□□□□ -1.1
SMG5-205ENST00000489907 PRSS38A1L453 326 aa8.15□□□□□ -1.1
SMG5-205ENST00000489907 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
SMG5-205ENST00000489907 A8MX80 341 aa8.15□□□□□ -1.1
SMG5-205ENST00000489907 HTRA2O43464 458 aaPredicted RBP8.15□□□□□ -1.1
SMG5-205ENST00000489907 CREB3O43889 395 aa8.15□□□□□ -1.1
SMG5-205ENST00000489907 LCA5LO95447 670 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms