RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	HACD1	B0YJ81	288 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	APOC4-APOC2	K7ER74	178 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PDE2A	O00408	941 aa	Predicted RBP	11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	SNPH	O15079	494 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	ARHGAP6	O43182	974 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	AQP9	O43315	295 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	SIGLEC6	O43699	453 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	DKK1	O94907	266 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	TJP3	O95049	919 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	APOC2	P02655	101 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PTMA	P06454	111 aa	Known RBP	11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	MMP2	P08253	660 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	HOXC4	P09017	264 aa	Predicted RBP	11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	C1S	P09871	688 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	ZNF30	P17039	623 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	GM2A	P17900	193 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	SPINK2	P20155	84 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	KEL	P23276	732 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PTPN3	P26045	913 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PTPN7	P35236	360 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	DNAJC3	Q13217	504 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	XRCC4	Q13426	336 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PTPRR	Q15256	657 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PROX2	Q3B8N5	592 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	LRRC66	Q68CR7	880 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	ESRP1	Q6NXG1	681 aa	Known RBP	11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	CRTC1	Q6UUV9	634 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	TSPAN33	Q86UF1	283 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	PHACTR4	Q8IZ21	702 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	CBARP	Q8N350	705 aa	Predicted RBP	11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	LMX1A	Q8TE12	382 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	DTD2	Q96FN9	168 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	TEKT5	Q96M29	485 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	TBATA	Q96M53	351 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.09	□□□□□ -0.63	1e-6	■■■■□ 21.5
GGA1-222	ENST00000489772	VAT1	Q99536	393 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	FERMT1	Q9BQL6	677 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	OSBPL8	Q9BZF1	889 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	TRIM10	Q9UDY6	481 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	KL	Q9UEF7	1012 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	ASPM	Q8IZT6	3477 aa		11.09	□□□□□ -0.63
GGA1-222	ENST00000489772	CABIN1	Q9Y6J0	2220 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	GOLGA6C	A6NDK9	693 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	GOLGA6B	A6NDN3	693 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	MIF4GD	A9UHW6	222 aa	Known RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	ANKRD66	B4E2M5	251 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772		K7ESM1	405 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	KRT86	O43790	486 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	NRDC	O43847	1150 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	RFPL3	O75679	317 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	RASGRP1	O95267	797 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	PRL	P01236	227 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	GOLGA6D	P0CG33	693 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	PYGM	P11217	842 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	CTSE	P14091	401 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	TSHR	P16473	764 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	TRIM23	P36406	574 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	HK3	P52790	923 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	KIAA1024L	P59773	190 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	SRP54	P61011	504 aa	Known RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	DAB2	P98082	770 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	PTS	Q03393	145 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	WASHC5	Q12768	1159 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	ILK	Q13418	452 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	SLC14A2	Q15849	920 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	ALG11	Q2TAA5	492 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	PRRT3	Q5FWE3	981 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	CCDC70	Q6NSX1	233 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772		Q6ZVL8	140 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	HID1	Q8IV36	788 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	RAVER1	Q8IY67	606 aa	Known RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	RBFA	Q8N0V3	343 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	FSTL5	Q8N475	847 aa	Predicted RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	OR56A4	Q8NGH8	313 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	HTR3C	Q8WXA8	447 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	ALG3	Q92685	438 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	FUBP1	Q96AE4	644 aa	Known RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	WDR92	Q96MX6	357 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	CNTNAP3B	Q96NU0	1288 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	LYSMD1	Q96S90	227 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	MLPH	Q9BV36	600 aa	Predicted RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	CNTNAP3	Q9BZ76	1288 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	CAAP1	Q9H8G2	361 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	USP29	Q9HBJ7	922 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	GLOD4	Q9HC38	313 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	EVA1B	Q9NVM1	165 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	GOLGA6A	Q9NYA3	693 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	NCKIPSD	Q9NZQ3	722 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	KLK13	Q9UKR3	277 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	ADGRG1	Q9Y653	693 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	ACACB	O00763	2458 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772	TRPM6	Q9BX84	2022 aa		11.08	□□□□□ -0.64
GGA1-222	ENST00000489772		A0A0U1RQJ8	604 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	FAM221B	A6H8Z2	402 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	LMO7DN	F2Z398	122 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772		H7C0C1	242 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TPP1	O14773	563 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	FTCD	O95954	541 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms