RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DOCK6Q96HP0 2047 aa10.02□□□□□ -0.8
USP11-211ENST00000489111 DENND4AQ7Z401 1863 aa10.02□□□□□ -0.8
USP11-211ENST00000489111 TMEM120BA0PK00 339 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 OR51F1A6NGY5 319 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 NPIPB15A6NHN6 443 aaPredicted RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 CD3EAPO15446 510 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 SYNCRIPO60506 623 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 ASGR2P07307 311 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 CTSLP07711 333 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 HNRNPLP14866 589 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP11-211ENST00000489111 OGNP20774 298 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 ITGB7P26010 798 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 VIPR1P32241 457 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 MC4RP32245 332 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 HMGCLP35914 325 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 ABCG1P45844 678 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 GYS2P54840 703 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 MPP1Q00013 466 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 CTBP1Q13363 440 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 ARHGEF7Q14155 803 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 PTPRCAPQ14761 206 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 STARD3Q14849 445 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 PTPRRQ15256 657 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 SEPT7Q16181 437 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 POM121L1PQ3SYA9 428 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 LRRC73Q5JTD7 316 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 AARS2Q5JTZ9 985 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 C9orf64Q5T6V5 341 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 LRRC66Q68CR7 880 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 SDE2Q6IQ49 451 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 TRMT11Q7Z4G4 463 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 ANKRD42Q8N9B4 389 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 C2CD4AQ8NCU7 369 aaPredicted RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 TMIEQ8NEW7 156 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 OR4L1Q8NH43 312 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 HCAR2Q8TDS4 363 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 MZB1Q8WU39 189 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 SCRN2Q96FV2 425 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 MSANTD3Q96H12 275 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 CDKN2AIPNLQ96HQ2 116 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 VPS39Q96JC1 886 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 LYSMD1Q96S90 227 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 KLF6Q99612 283 aaPredicted RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 SUDS3Q9H7L9 328 aaPredicted RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 BPIFA1Q9NP55 256 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 SSU72Q9NP77 194 aaKnown RBP10.02□□□□□ -0.81
USP11-211ENST00000489111 HEBP1Q9NRV9 189 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 B4GALT6Q9UBX8 382 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 FKBPLQ9UIM3 349 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 STARD13Q9Y3M8 1113 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 SLC30A1Q9Y6M5 507 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 STON1Q9Y6Q2 735 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 CDH23Q9H251 3354 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 NUP205Q92621 2012 aa10.02□□□□□ -0.81
USP11-211ENST00000489111 CHD5Q8TDI0 1954 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 A0A1W2PPM1 405 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 FAM47DPA6NHR8 397 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 C16orf96A6NNT2 1141 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 A8MX80 341 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 GOLGA8RI6L899 631 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 COPEO14579 308 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 SPAG7O75391 227 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 CLDN7O95471 211 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 IL1BP01584 269 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 F7P08709 466 aaPredicted RBP10.01□□□□□ -0.81
USP11-211ENST00000489111 PYGBP11216 843 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 SRFP11831 508 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 BMP1P13497 986 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 GLULP15104 373 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 ZNF30P17039 623 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 ITGALP20701 1170 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 DRD1P21728 446 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 PSMA3P25788 255 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 TIE1P35590 1138 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 SPAM1P38567 509 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 WASP42768 502 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 PSMD8P48556 350 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 CLCN5P51795 746 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 SLC12A2P55011 1212 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 PON2Q15165 354 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 ZRANB3Q5FWF4 1079 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 RNF187Q5TA31 235 aaPredicted RBP10.01□□□□□ -0.81
USP11-211ENST00000489111 EMC10Q5UCC4 262 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 FAM46CQ5VWP2 391 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 ZDHHC20Q5W0Z9 365 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 TXNDC11Q6PKC3 985 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 CRTC1Q6UUV9 634 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 TIFABQ6ZNK6 161 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 PARS2Q7L3T8 475 aaKnown RBP10.01□□□□□ -0.81
USP11-211ENST00000489111 GALNT7Q86SF2 657 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 TTC7BQ86TV6 843 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 TSPAN33Q86UF1 283 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 ZC3HC1Q86WB0 502 aaKnown RBP10.01□□□□□ -0.81
USP11-211ENST00000489111 CILP2Q8IUL8 1156 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 DCLK2Q8N568 766 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 GPATCH11Q8N954 259 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 GPR150Q8NGU9 434 aa10.01□□□□□ -0.81
USP11-211ENST00000489111 PIP4K2CQ8TBX8 421 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms