RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 C10orf120Q5SQS8 335 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 RSPO2Q6UXX9 243 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 ISCA2Q86U28 154 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 DDIASQ8IXT1 998 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 GALNT15Q8N3T1 639 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SLCO4A1Q96BD0 722 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 UBXN10Q96LJ8 280 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 TRIM62Q9BVG3 475 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 MRPL1Q9BYD6 325 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PRKD2Q9BZL6 878 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 COQ10BQ9H8M1 238 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 ARNT2Q9HBZ2 717 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 BPIFA1Q9NP55 256 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SEMA4BQ9NPR2 832 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 TBC1D30Q9Y2I9 924 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PLXNA3P51805 1871 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SLC12A8A0AV02 714 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 SLC7A2P52569 658 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 XIAPP98170 497 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 GRM2Q14416 872 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 RBM44Q6ZP01 1051 aaKnown RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 IFNEQ86WN2 208 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 RASAL3Q86YV0 1011 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 FUNDC1Q8IVP5 155 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 UMODL1-AS1Q8N2C9 162 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 PTGR2Q8N8N7 351 aaPredicted RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 CCDC97Q96F63 343 aaPredicted RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 SERPINB11Q96P15 392 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 DDX18Q9NVP1 670 aaKnown RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 C6orf203Q9P0P8 240 aaPredicted RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 TRPC5OSA6NMA1 111 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 WASH4PA8MWX3 477 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 LDB2O43679 373 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 ADSLP30566 484 aaPredicted RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 OR1E1P30953 314 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 HTR7P34969 479 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 CASP2P42575 452 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 AGTR2P50052 363 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 RAB27AP51159 221 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 UNC50Q53HI1 259 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 KIAA0408Q6ZU52 694 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 CHSY3Q70JA7 882 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 ZNF598Q86UK7 904 aaKnown RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 ARRDC2Q8TBH0 407 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 STON2Q8WXE9 905 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 EME1Q96AY2 570 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 SLC30A3Q99726 388 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 AKTIPQ9H8T0 292 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 MID1IP1Q9NPA3 183 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 VPS45Q9NRW7 570 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 UTP6Q9NYH9 597 aaKnown RBP12.69□□□□□ -0.38
CLIC4-202ENST00000488683 TLR6Q9Y2C9 796 aa12.69□□□□□ -0.38
CLIC4-202ENST00000488683 PDLIM1O00151 329 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 WISP3O95389 354 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 CLIC3O95833 236 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 ATXN1LP0C7T5 689 aaKnown RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 HSPA1AP0DMV8 641 aaKnown RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 HSPA1BP0DMV9 641 aaKnown RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 FMO4P31512 558 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 TAF10Q12962 218 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 LRP8Q14114 963 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 TICAM1Q8IUC6 712 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 TMEM102Q8N9M5 508 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 PPWD1Q96BP3 646 aaKnown RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 SPON2Q9BUD6 331 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 LIN28AQ9H9Z2 209 aaKnown RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 MEAF6Q9HAF1 191 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 EVLQ9UI08 416 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 ASB1Q9Y576 335 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 DNAJC15Q9Y5T4 150 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 PRSS51A0A1B0GVH4 220 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 MROH6A6NGR9 719 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 SAC3D1A6NKF1 404 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 IQCF5A8MTL0 148 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 MRASO14807 208 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 TFAP2AP05549 437 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 TYMPP19971 482 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 FLT3LGP49771 235 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 RENBPP51606 427 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 CLCN5P51795 746 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 CDH15P55291 814 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 NRG1Q02297 640 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 POLD3Q15054 466 aaPredicted RBP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 SLC14A2Q15849 920 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLIC4-202ENST00000488683 NADK2Q4G0N4 442 aa12.68□□□□□ -0.38
CLIC4-202ENST00000488683 AGAP9Q5VTM2 703 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms