RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MGAQ8IWI9 3026 aa11.32□□□□□ -0.6
NIPAL3-207ENST00000488155 CFAP69A5D8W1 941 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 B4DGG1 531 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 SOCS5O75159 536 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 PROSCO94903 275 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 HEXIM1O94992 359 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 PGLSO95336 258 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 TPM3P06753 285 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 H2AFZP0C0S5 128 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 CYP2A6P11509 494 aaPredicted RBP11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 LSSP48449 732 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 ARSEP51690 589 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 DSC2Q02487 901 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 ARHGEF7Q14155 803 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 MESDQ14696 234 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 RAET1GQ6H3X3 334 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 Q6ZVL8 140 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 H2AFVQ71UI9 128 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 HEATR4Q86WZ0 1026 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 SPACA3Q8IXA5 215 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 RNF214Q8ND24 703 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 CTNNBL1Q8WYA6 563 aaPredicted RBP11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.68e-6■■■■□ 19.3
NIPAL3-207ENST00000488155 CHP1Q99653 195 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 DPEP2Q9H4A9 486 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 WDR26Q9H7D7 661 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 CARS2Q9HA77 564 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 RBM22Q9NW64 420 aaKnown RBP eCLIP11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 NENFQ9UMX5 172 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 CHKBQ9Y259 395 aa11.31□□□□□ -0.6
NIPAL3-207ENST00000488155 SDK2Q58EX2 2172 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 A0A1W2PQM1 296 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 PRSS38A1L453 326 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 AKR1B10O60218 316 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 RPLP0P05388 317 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 TNNT1P13805 278 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 KELP23276 732 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 NFKBIAP25963 317 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 RBMS1P29558 406 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 TRIM23P36406 574 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 GNPDA1P46926 289 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 POLD2P49005 469 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 EPHB1P54762 984 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 PCBP4P57723 403 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 CXADRP78310 365 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 GBE1Q04446 702 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 GALNT2Q10471 571 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 IHHQ14623 411 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 DOK6Q6PKX4 331 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 LVRNQ6Q4G3 990 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 B3GNT8Q7Z7M8 397 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 LSMEM2Q8N112 164 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 TEX26Q8N6G2 289 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 CCNYQ8ND76 341 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 ZNF248Q8NDW4 579 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 OR8K1Q8NGG5 319 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 PIH1D2Q8WWB5 315 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 DTD2Q96FN9 168 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 ZNF578Q96N58 590 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 FCRL3Q96P31 734 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 GFM1Q96RP9 751 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 EPB41L5Q9HCM4 733 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 ASCL3Q9NQ33 180 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 PHPT1Q9NRX4 125 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 RCOR3Q9P2K3 495 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 UVRAGQ9P2Y5 699 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 ATXN7L1Q9ULK2 861 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 DGKBQ9Y6T7 804 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 COL6A6A6NMZ7 2263 aa11.3□□□□□ -0.6
NIPAL3-207ENST00000488155 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 A0A1W2PQ67 120 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 EIF4E1BA6NMX2 242 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 NTN3O00634 580 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 KLK10O43240 276 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 CBFA2T2O43439 604 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 TCEA3O75764 348 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 TNFSF15O95150 251 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 FUCA1P04066 466 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 HLA-DQB2P05538 268 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 MYCLP1P12525 358 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 AK4P27144 223 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 HNRNPH3P31942 346 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 GPR1P46091 355 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 PDX1P52945 283 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 CDK3Q00526 305 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 TLE3Q04726 772 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 SLC10A2Q12908 348 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 PAFAH1B3Q15102 231 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms