RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 LGSNQ5TDP6 509 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 IYDQ6PHW0 289 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PAOXQ6QHF9 649 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ADCY4Q8NFM4 1077 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 BHMTQ93088 406 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 CDCA3Q99618 268 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 YIPF2Q9BWQ6 316 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 SLC13A1Q9BZW2 595 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 KLC2Q9H0B6 622 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 TASP1Q9H6P5 420 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PLGRKTQ9HBL7 147 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 RIMS3Q9UJD0 308 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 DNAJC16Q9Y2G8 782 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 TDRKHQ9Y2W6 561 aaKnown RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ZFP37Q9Y6Q3 630 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 EYSQ5T1H1 3165 aa13.77□□□□□ -0.2
COPS7B-221ENST00000488111 CXorf49A8MYA2 514 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-221ENST00000488111 DFFAO00273 331 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 ITM2AO43736 263 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 FGF19O95750 216 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 PRKCHP24723 683 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 ACADVLP49748 655 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 BASP1P80723 227 aaKnown RBP13.77□□□□□ -0.21
COPS7B-221ENST00000488111 GSTM4Q03013 218 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 MLLT1Q03111 559 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-221ENST00000488111 ADGRF1Q5T601 910 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 PACS1Q6VY07 963 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 ZCCHC23Q6ZST2 131 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 MAVSQ7Z434 540 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 EFCAB3Q8N7B9 438 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.21
COPS7B-221ENST00000488111 DNAJC28Q9NX36 388 aa13.77□□□□□ -0.21
COPS7B-221ENST00000488111 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 DRGXA6NNA5 263 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 FGF10O15520 208 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-221ENST00000488111 PRAMEF12O95522 483 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF23P17027 643 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 ALDH3B2P48448 385 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 KCNJ11Q14654 390 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 LRIT3Q3SXY7 679 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 FRMD7Q6ZUT3 714 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 CTAGE3PQ8IX95 158 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 LEMD2Q8NC56 503 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 SH3RF2Q8TEC5 729 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 USP13Q92995 863 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-221ENST00000488111 CEP41Q9BYV8 373 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 SLC39A8Q9C0K1 460 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF711Q9Y462 761 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 OBSL1O75147 1896 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF197O14709 1029 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 GSRP00390 522 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 ALOX15P16050 662 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-221ENST00000488111 RHOQP17081 205 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 IDH3AP50213 366 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 OXCT1P55809 520 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 SPIDRQ14159 915 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 MBLAC2Q68D91 279 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 PDPK2PQ6A1A2 396 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 SYCE2Q6PIF2 218 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 AMIGO2Q86SJ2 522 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 ARHGAP12Q8IWW6 846 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 CFAP36Q96G28 342 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 LRGUKQ96M69 825 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 SEPT10Q9P0V9 454 aa13.76□□□□□ -0.21
COPS7B-221ENST00000488111 BCLAF3A2AJT9 711 aaKnown RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 IGFBP4P22692 258 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 HTR7P34969 479 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 CDKL1Q00532 357 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 BMPR2Q13873 1038 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 PDK1Q15118 436 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 Q6ZNB5 142 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 CDKL3Q8IVW4 592 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 EFHBQ8N7U6 833 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 QKIQ96PU8 341 aaKnown RBP eCLIP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 HAUS8Q9BT25 410 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 PLAC1Q9HBJ0 212 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 TDP1Q9NUW8 608 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 LSM7Q9UK45 103 aaKnown RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 ARHGAP26Q9UNA1 814 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 KCNK1O00180 336 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 LYPLA1O75608 230 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 KRT38O76015 456 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 DDX6P26196 483 aaKnown RBP eCLIP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 OR1E1P30953 314 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 RAB15P59190 212 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 FASTKD1Q53R41 847 aaKnown RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 C6orf52Q5T4I8 152 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 HEATR6Q6AI08 1181 aaKnown RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 ANKRD54Q6NXT1 300 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 ZFP1Q6P2D0 407 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 NDUFAF2Q8N183 169 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms