RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 PDXPQ96GD0 296 aa23.74■■□□□ 1.39
RNF38-208ENST00000488058 MCCC1Q96RQ3 725 aaPredicted RBP23.74■■□□□ 1.39
RNF38-208ENST00000488058 WDR26Q9H7D7 661 aa23.74■■□□□ 1.39
RNF38-208ENST00000488058 PCDH9Q9HC56 1237 aa23.74■■□□□ 1.39
RNF38-208ENST00000488058 SALL4Q9UJQ4 1053 aa23.74■■□□□ 1.39
RNF38-208ENST00000488058 RCCD1A6NED2 376 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 CST8O60676 142 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 KIAA1024LP59773 190 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 CDKN3Q16667 212 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 LRRC66Q68CR7 880 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 Q6ZVL8 140 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 FAM181AQ8N9Y4 354 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 KDF1Q8NAX2 398 aaPredicted RBP23.73■■□□□ 1.39
RNF38-208ENST00000488058 ACRBPQ8NEB7 543 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 DTD2Q96FN9 168 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 TBATAQ96M53 351 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 AGAP3Q96P47 875 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 OLFM3Q96PB7 478 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 CLPBQ9H078 707 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 SAE1Q9UBE0 346 aaPredicted RBP23.73■■□□□ 1.39
RNF38-208ENST00000488058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.73■■□□□ 1.39
RNF38-208ENST00000488058 PPIL1Q9Y3C6 166 aa23.73■■□□□ 1.39
RNF38-208ENST00000488058 A0A0J9YYE9 177 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 CPED1A4D0V7 1026 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 TMEM202A6NGA9 273 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 PSMD11O00231 422 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 TPP1O14773 563 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 TNFP01375 233 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 TRBC1P01850 177 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 KELP23276 732 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 ELOCQ15369 112 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 RAET1GQ6H3X3 334 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 CRTC1Q6UUV9 634 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 KATNAL2Q8IYT4 538 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 FSTL5Q8N475 847 aaPredicted RBP23.72■■□□□ 1.39
RNF38-208ENST00000488058 CNTD1Q8N815 330 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 OR56A4Q8NGH8 313 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 BAG1Q99933 345 aaPredicted RBP23.72■■□□□ 1.39
RNF38-208ENST00000488058 LGR4Q9BXB1 951 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 SUDS3Q9H7L9 328 aaPredicted RBP23.72■■□□□ 1.39
RNF38-208ENST00000488058 MRPL40Q9NQ50 206 aaKnown RBP23.72■■□□□ 1.39
RNF38-208ENST00000488058 KCTD5Q9NXV2 234 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 CD84Q9UIB8 345 aa23.72■■□□□ 1.39
RNF38-208ENST00000488058 REXO2Q9Y3B8 237 aaKnown RBP23.72■■□□□ 1.39
RNF38-208ENST00000488058 LY6G6EA0A0G2JKS1 128 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 CAPN8A6NHC0 703 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 LMO7DNF2Z398 122 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 YY2O15391 372 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 ZRANB2O95218 330 aaKnown RBP eCLIP23.71■■□□□ 1.39
RNF38-208ENST00000488058 PECAM1P16284 738 aaPredicted RBP23.71■■□□□ 1.39
RNF38-208ENST00000488058 E2F1Q01094 437 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 INSM1Q01101 510 aaPredicted RBP23.71■■□□□ 1.39
RNF38-208ENST00000488058 TFDP3Q5H9I0 405 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 KCTD16Q68DU8 428 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 KIAA1328Q86T90 577 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 HEATR4Q86WZ0 1026 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 RCOR2Q8IZ40 523 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 IFI44Q8TCB0 444 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 OR1E3Q8WZA6 343 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 KRT35Q92764 455 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 GLMNQ92990 594 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 HAUS1Q96CS2 278 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 RBM41Q96IZ5 413 aaKnown RBP23.71■■□□□ 1.39
RNF38-208ENST00000488058 CCDC86Q9H6F5 360 aaKnown RBP23.71■■□□□ 1.39
RNF38-208ENST00000488058 USP29Q9HBJ7 922 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 FGF22Q9HCT0 170 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 PHPT1Q9NRX4 125 aaPredicted RBP23.71■■□□□ 1.39
RNF38-208ENST00000488058 DUSP10Q9Y6W6 482 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 U3KQA8 63 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 MYLKQ15746 1914 aa23.71■■□□□ 1.39
RNF38-208ENST00000488058 CEP295Q9C0D2 2601 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 GOLGA4Q13439 2230 aaKnown RBP23.7■■□□□ 1.38
RNF38-208ENST00000488058 TRABD2BA6NFA1 517 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 PRLP01236 227 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 MMP2P08253 660 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 TGM2P21980 687 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 TRIM23P36406 574 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 SKOR1P84550 965 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 TARDBPQ13148 414 aaKnown RBP eCLIP23.7■■□□□ 1.38
RNF38-208ENST00000488058 NR0B2Q15466 257 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 TAZQ16635 292 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 C6orf132Q5T0Z8 1188 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 GUSBP11Q6P575 273 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 RFLNAQ6ZTI6 216 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 BZW1Q7L1Q6 419 aaKnown RBP23.7■■□□□ 1.38
RNF38-208ENST00000488058 EFL1Q7Z2Z2 1120 aaKnown RBP23.7■■□□□ 1.38
RNF38-208ENST00000488058 GKN2Q86XP6 184 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 MDM1Q8TC05 714 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 P3H4Q92791 437 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 RBM15Q96T37 977 aaKnown RBP eCLIP23.7■■□□□ 1.38
RNF38-208ENST00000488058 BRD8Q9H0E9 1235 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 CYP4F12Q9HCS2 524 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 NCKIPSDQ9NZQ3 722 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 SIRPGQ9P1W8 387 aa23.7■■□□□ 1.38
RNF38-208ENST00000488058 AKAP13Q12802 2813 aa23.69■■□□□ 1.38
RNF38-208ENST00000488058 hCG_1818297A0A087WSY0 165 aa23.69■■□□□ 1.38
RNF38-208ENST00000488058 PDE2AO00408 941 aaPredicted RBP23.69■■□□□ 1.38
RNF38-208ENST00000488058 MYCLP1P12525 358 aaPredicted RBP23.69■■□□□ 1.38
RNF38-208ENST00000488058 ZNF30P17039 623 aa23.69■■□□□ 1.38
RNF38-208ENST00000488058 GPR1P46091 355 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms