RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 SLC18A3Q16572 532 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 WDR38Q5JTN6 314 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 GTF2H2CQ6P1K8 395 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 DSELQ8IZU8 1212 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 VGLL1Q99990 258 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 TRIM51Q9BSJ1 452 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 HAUS8Q9BT25 410 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 TFB2MQ9H5Q4 396 aaKnown RBP3.03□□□□□ -1.92
SMC4-220ENST00000488017 SMYD2Q9NRG4 433 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 TP53TG3Q9ULZ0 132 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 A0A087X002 238 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 RTL8CO15255 209 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 PRG2P13727 222 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 CD72P21854 359 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 BLKP51451 505 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 BTKQ06187 659 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 UGP2Q16851 508 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 GPATCH4Q5T3I0 446 aaKnown RBP3.02□□□□□ -1.93
SMC4-220ENST00000488017 RRAGAQ7L523 313 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 TAOK1Q7L7X3 1001 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 SYT13Q7L8C5 426 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 ZNF34Q8IZ26 560 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 MOCOSQ96EN8 888 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 MASTLQ96GX5 879 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 MCRIP2Q9BUT9 160 aaKnown RBP3.02□□□□□ -1.93
SMC4-220ENST00000488017 FGF22Q9HCT0 170 aa3.02□□□□□ -1.93
SMC4-220ENST00000488017 MAP3K20Q9NYL2 800 aaKnown RBP3.02□□□□□ -1.93
SMC4-220ENST00000488017 CTAGE9A4FU28 777 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 E7EVH7 732 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 SYNGR3O43761 229 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 CHRM4P08173 479 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 CTAGE8P0CG41 777 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 HOXA13P31271 388 aaPredicted RBP3.01□□□□□ -1.93
SMC4-220ENST00000488017 RUNX1T1Q06455 604 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 ITGADQ13349 1161 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 EDRF1Q3B7T1 1238 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 CCDC181Q5TID7 509 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 TRPT1Q86TN4 253 aaKnown RBP3.01□□□□□ -1.93
SMC4-220ENST00000488017 TBC1D26Q86UD7 250 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 TMTC1Q8IUR5 882 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 CTAGE4Q8IX94 777 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 CSGALNACT1Q8TDX6 532 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 CABLES2Q9BTV7 478 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 G6PC2Q9NQR9 355 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 BARHL2Q9NY43 387 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 RASAL2Q9UJF2 1139 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 OR2W1Q9Y3N9 320 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 ZHX2Q9Y6X8 837 aa3.01□□□□□ -1.93
SMC4-220ENST00000488017 ARHGAP10A1A4S6 786 aa3□□□□□ -1.93
SMC4-220ENST00000488017 H0Y3Z8 333 aa3□□□□□ -1.93
SMC4-220ENST00000488017 KLK8O60259 260 aa3□□□□□ -1.93
SMC4-220ENST00000488017 EGFP01133 1207 aa3□□□□□ -1.93
SMC4-220ENST00000488017 DDX5P17844 614 aaKnown RBP3□□□□□ -1.93
SMC4-220ENST00000488017 RBM5P52756 815 aaKnown RBP eCLIP3□□□□□ -1.93
SMC4-220ENST00000488017 HNRNPH2P55795 449 aaKnown RBP3□□□□□ -1.93
SMC4-220ENST00000488017 YWHAZP63104 245 aaKnown RBP3□□□□□ -1.93
SMC4-220ENST00000488017 PDE1BQ01064 536 aa3□□□□□ -1.93
SMC4-220ENST00000488017 RIGQ13278 110 aa3□□□□□ -1.93
SMC4-220ENST00000488017 HLTFQ14527 1009 aaKnown RBP eCLIP3□□□□□ -1.93
SMC4-220ENST00000488017 ZNF234Q14588 700 aa3□□□□□ -1.93
SMC4-220ENST00000488017 TMEM187Q14656 261 aa3□□□□□ -1.93
SMC4-220ENST00000488017 PFKFB4Q16877 469 aa3□□□□□ -1.93
SMC4-220ENST00000488017 MMEL1Q495T6 779 aa3□□□□□ -1.93
SMC4-220ENST00000488017 SLC36A4Q6YBV0 504 aa3□□□□□ -1.93
SMC4-220ENST00000488017 CEP70Q8NHQ1 597 aa3□□□□□ -1.93
SMC4-220ENST00000488017 RNFT2Q96EX2 444 aa3□□□□□ -1.93
SMC4-220ENST00000488017 ZC3HAV1LQ96H79 300 aaKnown RBP3□□□□□ -1.93
SMC4-220ENST00000488017 SGCZQ96LD1 299 aa3□□□□□ -1.93
SMC4-220ENST00000488017 METTL14Q9HCE5 456 aaKnown RBP3□□□□□ -1.93
SMC4-220ENST00000488017 TLR8Q9NR97 1041 aaKnown RBP3□□□□□ -1.93
SMC4-220ENST00000488017 DAAM1Q9Y4D1 1078 aa3□□□□□ -1.93
SMC4-220ENST00000488017 E9PQ18 207 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 CORO1AP31146 461 aaKnown RBP2.99□□□□□ -1.93
SMC4-220ENST00000488017 SERPINF1P36955 418 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 RPL24P83731 157 aaKnown RBP2.99□□□□□ -1.93
SMC4-220ENST00000488017 LIN54Q6MZP7 749 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 ZNF790Q6PG37 636 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 KCTD18Q6PI47 426 aaPredicted RBP2.99□□□□□ -1.93
SMC4-220ENST00000488017 MTSS1LQ765P7 747 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 ERC1Q8IUD2 1116 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 CCAR1Q8IX12 1150 aaKnown RBP2.99□□□□□ -1.93
SMC4-220ENST00000488017 ZNF527Q8NB42 609 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 SH3KBP1Q96B97 665 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 ZNF570Q96NI8 536 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 NEURL2Q9BR09 285 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 ESRP2Q9H6T0 727 aaKnown RBP2.99□□□□□ -1.93
SMC4-220ENST00000488017 KLHL42Q9P2K6 505 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 RCOR1Q9UKL0 485 aa2.99□□□□□ -1.93
SMC4-220ENST00000488017 ADAMTS9Q9P2N4 1935 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 C17orf113A0A1B0GUU1 675 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 CIDEAO60543 219 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 SKAP2O75563 359 aaPredicted RBP2.98□□□□□ -1.93
SMC4-220ENST00000488017 PPM1AP35813 382 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 ISL1P61371 349 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 TECRLQ5HYJ1 363 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 ANKRD54Q6NXT1 300 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 RBMS3Q6XE24 437 aaKnown RBP2.98□□□□□ -1.93
SMC4-220ENST00000488017 DDHD1Q8NEL9 900 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 OR6Y1Q8NGX8 325 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 FCAMRQ8WWV6 532 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms