RNA–Protein interactions for RNA: ENST00000487841.5

SFT2D1-204, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,576 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-204ENST00000487841 YIPF3Q9GZM5 350 aa12.81□□□□□ -0.36
SFT2D1-204ENST00000487841 GSTO2Q9H4Y5 243 aa12.81□□□□□ -0.36
SFT2D1-204ENST00000487841 PDFQ9HBH1 243 aa12.81□□□□□ -0.36
SFT2D1-204ENST00000487841 OLA1Q9NTK5 396 aaKnown RBP12.81□□□□□ -0.36
SFT2D1-204ENST00000487841 POLR3BQ9NW08 1133 aaPredicted RBP12.81□□□□□ -0.36
SFT2D1-204ENST00000487841 A6NHS1 94 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 NPHS1O60500 1241 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 SEC24AO95486 1093 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 SH3BP2P78314 561 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 FLOT2Q14254 428 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 BNC2Q6ZN30 1099 aaPredicted RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 OR4L1Q8NH43 312 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 CDKN2AIPNLQ96HQ2 116 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.364e-6■□□□□ 10.5
SFT2D1-204ENST00000487841 PCDHAC1Q9H158 963 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 ADA2Q9NZK5 511 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 IKZF3Q9UKT9 509 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 TBC1D4O60343 1298 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 OR1I1O60431 355 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 ACSL4O60488 711 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 PAPSS2O95340 614 aaPredicted RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 POLD2P49005 469 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 ECT2LQ008S8 904 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 ZNF423Q2M1K9 1284 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 LCA5Q86VQ0 697 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 DCBLD1Q8N8Z6 715 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 BHLHE22Q8NFJ8 381 aaPredicted RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 MAELQ96JY0 434 aaKnown RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 HMX1Q9NP08 348 aaPredicted RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 DNMT3LQ9UJW3 386 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 TRAF6Q9Y4K3 522 aa12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 PRRC2BQ5JSZ5 2229 aaKnown RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 FNDC1Q4ZHG4 1894 aaPredicted RBP12.8□□□□□ -0.36
SFT2D1-204ENST00000487841 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 SLCO1B7G3V0H7 640 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 SNAP91O60641 907 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 RBP1P09455 135 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 ZDHHC11BP0C7U3 371 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CD1DP15813 335 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PRDX6P30041 224 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 RALGDSQ12967 914 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 AGKQ53H12 422 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PIGGQ5H8A4 983 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PITRM1Q5JRX3 1037 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PAQR3Q6TCH7 311 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CPSF7Q8N684 471 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 EFHBQ8N7U6 833 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PTGR2Q8N8N7 351 aaPredicted RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 LPCAT1Q8NF37 534 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 SLC30A3Q99726 388 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CINPQ9BW66 212 aaPredicted RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CATSPERZQ9NTU4 200 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 GMPR2Q9P2T1 348 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 STK39Q9UEW8 545 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CORO1CQ9ULV4 474 aaPredicted RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 ZNF840PA6NDX5 716 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 TRPC5OSA6NMA1 111 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 GOLGA8CPA6NN73 597 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 UBDO15205 165 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 GPC4O75487 556 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 ZNF37AP17032 561 aaPredicted RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CORO1AP31146 461 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 ALDH7A1P49419 539 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 YBEYP58557 167 aaPredicted RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 DNAJB13P59910 316 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 MRPS35P82673 323 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 RING1Q06587 406 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 MMEL1Q495T6 779 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 UNC50Q53HI1 259 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 AAGABQ6PD74 315 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PAOXQ6QHF9 649 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 GLT6D1Q7Z4J2 308 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 PELI3Q8N2H9 469 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 SLC43A3Q8NBI5 491 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 OR6K2Q8NGY2 324 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 AUTS2Q8WXX7 1259 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 TSPAN17Q96FV3 270 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 EFCAB1Q9HAE3 211 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
SFT2D1-204ENST00000487841 IQCF5A8MTL0 148 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 H3BNC9 293 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 TXNDC9O14530 226 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 RPP40O75818 363 aaKnown RBP12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 PRLP01236 227 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 MTHFD2P13995 350 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 IMPDH1P20839 514 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 NOGQ13253 232 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 SLC14A2Q15849 920 aa12.78□□□□□ -0.36
SFT2D1-204ENST00000487841 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms