RNA–Protein interactions for RNA: ENST00000485565.6

SPIN1-205, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-205ENST00000485565 PDHA1P08559 390 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 CYP2A6P11509 494 aaPredicted RBP17.96■□□□□ 0.47
SPIN1-205ENST00000485565 CTPS1P17812 591 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 KELP23276 732 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 ETV3P41162 512 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 ITKQ08881 620 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 CCDC173Q0VFZ6 552 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 RALGPS1Q5JS13 557 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 ARMC12Q5T9G4 340 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 RBM44Q6ZP01 1051 aaKnown RBP17.96■□□□□ 0.47
SPIN1-205ENST00000485565 LRRC49Q8IUZ0 686 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 SDR16C5Q8N3Y7 309 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 TPCN2Q8NHX9 752 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 CCDC74AQ96AQ1 378 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 SMIM14Q96QK8 99 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 ZNF670Q9BS34 389 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 TMEM168Q9H0V1 697 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 POLR1BQ9H9Y6 1135 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 CYP4F12Q9HCS2 524 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 SATB2Q9UPW6 733 aa17.96■□□□□ 0.47
SPIN1-205ENST00000485565 SCN8AQ9UQD0 1980 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 CBFA2T2O43439 604 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 HOXC4P09017 264 aaPredicted RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 LSSP48449 732 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 DSC2Q02487 901 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 TRIM14Q14142 442 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 SPIDRQ14159 915 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 IHHQ14623 411 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 PDK2Q15119 407 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 SKOR2Q2VWA4 1001 aaPredicted RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 ZFYVE27Q5T4F4 411 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 Q6ZVL8 140 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 TAF8Q7Z7C8 310 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 HEATR4Q86WZ0 1026 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 SFTPA2Q8IWL1 248 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 PQLC3Q8N755 202 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 CCL4L1Q8NHW4 92 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 PIH1D2Q8WWB5 315 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 MAML1Q92585 1016 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 FAF2Q96CS3 445 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 DTD2Q96FN9 168 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 SCRN2Q96FV2 425 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 FCRL3Q96P31 734 aaPredicted RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 MCCC1Q96RQ3 725 aaPredicted RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 CHP1Q99653 195 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 POLR1EQ9GZS1 481 aaKnown RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 SUDS3Q9H7L9 328 aaPredicted RBP17.95■□□□□ 0.46
SPIN1-205ENST00000485565 TTLL3Q9Y4R7 772 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 KALRNO60229 2985 aa17.95■□□□□ 0.46
SPIN1-205ENST00000485565 SSU72P8A0A1W2PR75 194 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 PRSS38A1L453 326 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 PMS2P1A4D2B8 440 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 GOLGA6CA6NDK9 693 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 GOLGA6BA6NDN3 693 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 TNFRSF10CO14798 259 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 MATN3O15232 486 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 AKR1B10O60218 316 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 TCEA3O75764 348 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 DXOO77932 396 aaKnown RBP17.94■□□□□ 0.46
SPIN1-205ENST00000485565 KRT7P08729 469 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 TMEM253P0C7T8 217 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 GOLGA6DP0CG33 693 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 MYCLP1P12525 358 aaPredicted RBP17.94■□□□□ 0.46
SPIN1-205ENST00000485565 NFKBIAP25963 317 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 PDX1P52945 283 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 GBE1Q04446 702 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 TLE3Q04726 772 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 ARHGEF7Q14155 803 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 MESDQ14696 234 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 IFI16Q16666 785 aaKnown RBP17.94■□□□□ 0.46
SPIN1-205ENST00000485565 TIGD7Q6NT04 549 aaPredicted RBP17.94■□□□□ 0.46
SPIN1-205ENST00000485565 USP45Q70EL2 814 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 VSTM4Q8IW00 320 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 MAP7D3Q8IWC1 876 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 SPACA3Q8IXA5 215 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 LSMEM2Q8N112 164 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 CBARPQ8N350 705 aaPredicted RBP17.94■□□□□ 0.46
SPIN1-205ENST00000485565 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 FAM46DQ8NEK8 389 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 RAPGEF5Q92565 580 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 ZNF578Q96N58 590 aaPredicted RBP17.94■□□□□ 0.46
SPIN1-205ENST00000485565 ASCL3Q9NQ33 180 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 ABHD10Q9NUJ1 306 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 SPTLC3Q9NUV7 552 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 RBM22Q9NW64 420 aaKnown RBP eCLIP17.94■□□□□ 0.467e-7■■□□□ 11.9
SPIN1-205ENST00000485565 GOLGA6AQ9NYA3 693 aa17.94■□□□□ 0.46
SPIN1-205ENST00000485565 MGAQ8IWI9 3026 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 B4DGG1 531 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 PSMD11O00231 422 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 NTN3O00634 580 aaPredicted RBP17.93■□□□□ 0.46
SPIN1-205ENST00000485565 FZD6O60353 706 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 PRB1P04280 392 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 CCNCP24863 283 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 MAN1A1P33908 653 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 PCBP4P57723 403 aaKnown RBP17.93■□□□□ 0.46
SPIN1-205ENST00000485565 SLC10A2Q12908 348 aaPredicted RBP17.93■□□□□ 0.46
SPIN1-205ENST00000485565 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 RAET1GQ6H3X3 334 aa17.93■□□□□ 0.46
SPIN1-205ENST00000485565 RFLNAQ6ZTI6 216 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms