RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, human

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPA-203	ENST00000485042	TAF4	O00268	1085 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	SCAMP1	O15126	338 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	ADAM20	O43506	726 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	HS6ST1	O60243	411 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	UGDH	O60701	494 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	ATP2C2	O75185	946 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	NKX2-2	O95096	273 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	HOXB5	P09067	269 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	TMEM11	P17152	192 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	ITGAX	P20702	1163 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	RFC1	P35251	1148 aa	Predicted RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	COPB2	P35606	906 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	SLC15A1	P46059	708 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	NRIP1	P48552	1158 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	HSD17B4	P51659	736 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	CLCN5	P51795	746 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	GALC	P54803	685 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	MFAP4	P55083	255 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	IK	Q13123	557 aa	Predicted RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	DRAP1	Q14919	205 aa	Predicted RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	TMEM119	Q4V9L6	283 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	GARNL3	Q5VVW2	1013 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF627	Q7L945	461 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	PTF1A	Q7RTS3	328 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	AVL9	Q8NBF6	648 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	OR4N2	Q8NGD1	307 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	NELL1	Q92832	810 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	MAP4K1	Q92918	833 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	SLC22A18	Q96BI1	424 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	SCNM1	Q9BWG6	230 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	IFIH1	Q9BYX4	1025 aa	Known RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	PLEKHA4	Q9H4M7	779 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	RANGRF	Q9HD47	186 aa	Predicted RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	WDR6	Q9NNW5	1121 aa	Known RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	BPIFA1	Q9NP55	256 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	SLC35C2	Q9NQQ7	365 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	GIMAP4	Q9NUV9	329 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	TAB2	Q9NYJ8	693 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	OGFR	Q9NZT2	677 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	UTS2R	Q9UKP6	389 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	LAMP3	Q9UQV4	416 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	RAP2C	Q9Y3L5	183 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.54	□□□□□ -1.68
XPA-203	ENST00000485042	LMO7	Q8WWI1	1683 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	LRRC37A3	O60309	1634 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	RGPD4	Q7Z3J3	1758 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	FAM237A	A0A1B0GTK4	181 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	C17orf102	A2RUQ5	167 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	C2CD4B	A6NLJ0	364 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	HSPB2	A8KAH6	182 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	EBAG9	O00559	213 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	TP73	O15350	636 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	RPN1	P04843	607 aa	Known RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ADRB1	P08588	477 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	SELL	P14151	372 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF182	P17025	639 aa	Predicted RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	CTPS1	P17812	591 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	BMP5	P22003	454 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	EPHB2	P29323	1055 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	SLC16A2	P36021	539 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	GPR12	P47775	334 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	CENPA	P49450	140 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	CAMP	P49913	170 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	UBXN2A	P68543	259 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	HSF1	Q00613	529 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	AIMP1	Q12904	312 aa	Known RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	STIM1	Q13586	685 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF268	Q14587	947 aa	Predicted RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	NAB2	Q15742	525 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	HSPB2	Q16082	182 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	TCTN1	Q2MV58	587 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ASTE1	Q2TB18	679 aa	Predicted RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.53	□□□□□ -1.68
XPA-203	ENST00000485042	JADE1	Q6IE81	842 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	FBXO42	Q6P3S6	717 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	LCTL	Q6UWM7	567 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF813	Q6ZN06	617 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	SERPINA11	Q86U17	422 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ARHGEF25	Q86VW2	580 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	VSIG1	Q86XK7	387 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	DNAAF5	Q86Y56	855 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	TMC8	Q8IU68	726 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	LINC00346	Q8IVM7	164 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	FAM185A	Q8N0U4	392 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	LRRC57	Q8N9N7	239 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	POMGNT2	Q8NAT1	580 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	APPL2	Q8NEU8	664 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	GJC3	Q8NFK1	279 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF398	Q8TD17	642 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	BCAS4	Q8TDM0	211 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	SGCD	Q92629	289 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	RNF183	Q96D59	192 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ARHGEF26	Q96DR7	871 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	ELMOD3	Q96FG2	381 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	CCDC34	Q96HJ3	373 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	TMEM68	Q96MH6	324 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	MXRA8	Q9BRK3	442 aa		4.53	□□□□□ -1.68
XPA-203	ENST00000485042	SRSF8	Q9BRL6	282 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms