RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PDK1Q15118 436 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TCEA2Q15560 299 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TAZQ16635 292 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 HES3Q5TGS1 186 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 C11orf63Q6NUN7 778 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 ZCCHC8Q6NZY4 707 aaKnown RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 SPOCD1Q6ZMY3 1216 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 Q6ZVL8 140 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 USP45Q70EL2 814 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TBATAQ96M53 351 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 WDR92Q96MX6 357 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 CEP41Q9BYV8 373 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 LUC7LQ9NQ29 371 aaKnown RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 HAUS2Q9NVX0 235 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 SAE1Q9UBE0 346 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 KLQ9UEF7 1012 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 A0A0J9YYE9 177 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 LMO7DNF2Z398 122 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 PSMD11O00231 422 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 CACNB4O00305 520 aaPredicted RBP12.9□□□□□ -0.34
HDAC1-209ENST00000484305 TPP1O14773 563 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 YY2O15391 372 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 KRT37O76014 449 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 RASGRP1O95267 797 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 TRBC1P01850 177 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 PECAM1P16284 738 aaPredicted RBP12.9□□□□□ -0.34
HDAC1-209ENST00000484305 CD86P42081 329 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 BLKP51451 505 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 EPHB1P54762 984 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 KIAA1024LP59773 190 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 SKOR1P84550 965 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 INSM1Q01101 510 aaPredicted RBP12.9□□□□□ -0.34
HDAC1-209ENST00000484305 PTSQ03393 145 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 CDKN3Q16667 212 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 KAZNQ674X7 775 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 CRTC1Q6UUV9 634 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 RFLNAQ6ZTI6 216 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 TECPR1Q7Z6L1 1165 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 KATNAL2Q8IYT4 538 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 ACRBPQ8NEB7 543 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 OR56A4Q8NGH8 313 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 MDM1Q8TC05 714 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 OR1E3Q8WZA6 343 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 KRT35Q92764 455 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 DTD2Q96FN9 168 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 PDXPQ96GD0 296 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 BOCQ9BWV1 1114 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 LACRTQ9GZZ8 138 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 WDR26Q9H7D7 661 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 PCDH9Q9HC56 1237 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 FGF22Q9HCT0 170 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 MRPL40Q9NQ50 206 aaKnown RBP12.9□□□□□ -0.34
HDAC1-209ENST00000484305 SEPT10Q9P0V9 454 aa12.9□□□□□ -0.34
HDAC1-209ENST00000484305 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TRABD2BA6NFA1 517 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TAF4O00268 1085 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 CST8O60676 142 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 ANXA6P08133 673 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 HOXC4P09017 264 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 CTSEP14091 401 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 DUSP3P51452 185 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 E2F1Q01094 437 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TFDP2Q14188 446 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 ELOCQ15369 112 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TFDP3Q5H9I0 405 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TMEM139Q8IV31 216 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 RCOR2Q8IZ40 523 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 FSTL5Q8N475 847 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 ATL2Q8NHH9 583 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 AGAP3Q96P47 875 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 RBM15Q96T37 977 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-209ENST00000484305 TEX101Q9BY14 249 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 KCTD5Q9NXV2 234 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 CD84Q9UIB8 345 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 DGKBQ9Y6T7 804 aa12.89□□□□□ -0.35
HDAC1-209ENST00000484305 DMXL2Q8TDJ6 3036 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 GOLGA6BA6NDN3 693 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CAPN8A6NHC0 703 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 TNFRSF10CO14798 259 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 OPA1O60313 960 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CLDN7O95471 211 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 TNFP01375 233 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 FUCA1P04066 466 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms