RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 TSNAXIP1Q2TAA8 658 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 ACCSLQ4AC99 568 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 CREB3L3Q68CJ9 461 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 FAM180AQ6UWF9 173 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 ENPP7Q6UWV6 458 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 ERN2Q76MJ5 926 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 CD163Q86VB7 1156 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 VPS36Q86VN1 386 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 C17orf82Q86X59 251 aaPredicted RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 ZNF761Q86XN6 746 aaPredicted RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 DMRTC2Q8IXT2 367 aaPredicted RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 DNAAF3Q8N9W5 541 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 SEC14L1Q92503 715 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 PLD4Q96BZ4 506 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 SCYL1Q96KG9 808 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 GPATCH1Q9BRR8 931 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 BRD8Q9H0E9 1235 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 CSNK1G1Q9HCP0 422 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 SPATS2LQ9NUQ6 558 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 DDX19AQ9NUU7 478 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 ARHGEF38Q9NXL2 777 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 ZNHIT2Q9UHR6 403 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 VPS51Q9UID3 782 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 KCNG1Q9UIX4 513 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 FADS3Q9Y5Q0 445 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 ATP8B3O60423 1300 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 SEC16AO15027 2179 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 NPHP3-ACAD11A0A0J9YXS1 232 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 NEMFO60524 1076 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 CUTAO60888 179 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 TACC1O75410 805 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
CHD6-209ENST00000482596 WISP2O76076 250 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 ATE1O95260 518 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 TIAF1O95411 115 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 RALAP11233 206 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 CCT6AP40227 531 aaKnown RBP6.49□□□□□ -1.37
CHD6-209ENST00000482596 CHRNA4P43681 627 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 NDST2P52849 883 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 SRP54P61011 504 aaKnown RBP6.49□□□□□ -1.37
CHD6-209ENST00000482596 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 ATP1A4Q13733 1029 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 KRT32Q14532 448 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 FAM133BQ5BKY9 247 aaKnown RBP6.49□□□□□ -1.37
CHD6-209ENST00000482596 PAMR1Q6UXH9 720 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 RINLQ6ZS11 566 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 KCNK18Q7Z418 384 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 TADA2BQ86TJ2 420 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 RASGRP3Q8IV61 690 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 FAM186BQ8IYM0 893 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 CFAP52Q8N1V2 620 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 ARFGAP1Q8N6T3 406 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 PPM1NQ8N819 430 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 CHST14Q8NCH0 376 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 DENND6BQ8NEG7 585 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 FUBP1Q96AE4 644 aaKnown RBP6.49□□□□□ -1.37
CHD6-209ENST00000482596 NACC2Q96BF6 587 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 WDR77Q9BQA1 342 aaPredicted RBP6.49□□□□□ -1.37
CHD6-209ENST00000482596 TMEM168Q9H0V1 697 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 PIF1Q9H611 641 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 C1GALT1Q9NS00 363 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 CLIC5Q9NZA1 410 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 KCNN3Q9UGI6 736 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 KLHL3Q9UH77 587 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 ITM2BQ9Y287 266 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 DOCK10Q96BY6 2186 aa6.49□□□□□ -1.37
CHD6-209ENST00000482596 NUP210LQ5VU65 1888 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 TRIM64A6NGJ6 449 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 TRIM64BA6NI03 449 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 FOXO6A8MYZ6 492 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 ALOX15BO15296 676 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 DTNBO60941 627 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 ECEL1O95672 775 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 CPA1P15085 419 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 HSD3B2P26439 372 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 CALRP27797 417 aaKnown RBP6.48□□□□□ -1.37
CHD6-209ENST00000482596 CHRNA3P32297 505 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 NNMTP40261 264 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 GPR3P46089 330 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 GYS2P54840 703 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 ZNF445P59923 1031 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 CCT2P78371 535 aaKnown RBP6.48□□□□□ -1.37
CHD6-209ENST00000482596 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 SYCP1Q15431 976 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 DLG2Q15700 870 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 MPP7Q5T2T1 576 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 RNF187Q5TA31 235 aaPredicted RBP6.48□□□□□ -1.37
CHD6-209ENST00000482596 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 MED25Q71SY5 747 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 TECPR1Q7Z6L1 1165 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 C11orf96Q7Z7L8 435 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 WDR49Q8IV35 697 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 ZBTB2Q8N680 514 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 BCORP1Q8N888 145 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 TMEM102Q8N9M5 508 aaPredicted RBP6.48□□□□□ -1.37
CHD6-209ENST00000482596 OR5B17Q8NGF7 314 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 SLC2A14Q8TDB8 520 aa6.48□□□□□ -1.37
CHD6-209ENST00000482596 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
CHD6-209ENST00000482596 NR4A3Q92570 626 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms