RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 EIF3IQ13347 325 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 IHHQ14623 411 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 ARMC12Q5T9G4 340 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 MAP7D3Q8IWC1 876 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 KYQ8NBH2 561 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 LSM14AQ8ND56 463 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 GPR156Q8NFN8 814 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 OR1E3Q8WZA6 343 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 SCRN2Q96FV2 425 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 LGR4Q9BXB1 951 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 STRADBQ9C0K7 418 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 TMEM168Q9H0V1 697 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 LRRN3Q9H3W5 708 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 DPEP2Q9H4A9 486 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 CYP4F12Q9HCS2 524 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 FGF22Q9HCT0 170 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 HAUS2Q9NVX0 235 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.255e-7■■■□□ 16
CTDSP1-208ENST00000482272 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.26
CTDSP1-208ENST00000482272 A0A0U1RQS6 177 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 KLK10O43240 276 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 HEXIM1O94992 359 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TNFSF15O95150 251 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 RPLP0P05388 317 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TPM3P06753 285 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 MYCLP1P12525 358 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 PNLIPP16233 465 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 GLB1P16278 677 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 CES1P23141 567 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 CASP14P31944 242 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 ARSEP51690 589 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TMPRSS3P57727 454 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 CCL7P80098 99 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TRAF2Q12933 501 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 CNGA3Q16281 694 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 FAM182AQ5T1J6 154 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TIGD7Q6NT04 549 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 SFTPA2Q8IWL1 248 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 CBARPQ8N350 705 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TEX26Q8N6G2 289 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 KCTD6Q8NC69 237 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 FAM71BQ8TC56 605 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 LRRN4Q8WUT4 740 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 SLC39A7Q92504 469 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 PRR11Q96HE9 360 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 TMEM74Q96NL1 305 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 SMIM14Q96QK8 99 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 PACSIN1Q9BY11 444 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 POLR1EQ9GZS1 481 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 NT5MQ9NPB1 228 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 CTTNBP2NLQ9P2B4 639 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 LCMT1Q9UIC8 334 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 RABGEF1Q9UJ41 708 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 APPL1Q9UKG1 709 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 ASXL3Q9C0F0 2248 aa13.45□□□□□ -0.26
CTDSP1-208ENST00000482272 A0A1W2PQM1 296 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PRSS38A1L453 326 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 GOLGA6CA6NDK9 693 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 ZW10O43264 779 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PGLSO95336 258 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 GOLGA6DP0CG33 693 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PTMSP20962 102 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 ETV3P41162 512 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PDX1P52945 283 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 INHBCP55103 352 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PEX6Q13608 980 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PAFAH1B3Q15102 231 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PDK2Q15119 407 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 C14orf28Q4W4Y0 310 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 USP45Q70EL2 814 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 HSD11B1LQ7Z5J1 315 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 FBXO39Q8N4B4 442 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 KIAA1524Q8TCG1 905 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 DTD2Q96FN9 168 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 SEMA3CQ99985 751 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 TEX101Q9BY14 249 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 GSDMCQ9BYG8 508 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 CARS2Q9HA77 564 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 EPB41L5Q9HCM4 733 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 GOLGA6AQ9NYA3 693 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 LRIT1Q9P2V4 623 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 UVRAGQ9P2Y5 699 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 PPIL1Q9Y3C6 166 aa13.44□□□□□ -0.26
CTDSP1-208ENST00000482272 IGSF10Q6WRI0 2623 aa13.43□□□□□ -0.26
CTDSP1-208ENST00000482272 B4DGG1 531 aa13.43□□□□□ -0.26
CTDSP1-208ENST00000482272 D6RAR5 112 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms