RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PTDSS2Q9BVG9 487 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 HEMGNQ9BXL5 484 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 CCSER1Q9C0I3 900 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 TRPV6Q9H1D0 765 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 TP63Q9H3D4 680 aaPredicted RBP4.21□□□□□ -1.74
VPS41-212ENST00000482217 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 SH2D4AQ9H788 454 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 PARVGQ9HBI0 331 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 SEMA4BQ9NPR2 832 aaPredicted RBP4.21□□□□□ -1.74
VPS41-212ENST00000482217 ABCB8Q9NUT2 735 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 MARCH4Q9P2E8 410 aaPredicted RBP4.21□□□□□ -1.74
VPS41-212ENST00000482217 ZNF212Q9UDV6 495 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 MAD2L2Q9UI95 211 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 SLCO3A1Q9UIG8 710 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 TUBE1Q9UJT0 475 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 PADI1Q9ULC6 663 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 SLC8A2Q9UPR5 921 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 CHKBQ9Y259 395 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 MAP3K2Q9Y2U5 619 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.21□□□□□ -1.74
VPS41-212ENST00000482217 KCNE2Q9Y6J6 123 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 GAKO14976 1311 aa4.21□□□□□ -1.74
VPS41-212ENST00000482217 TRGV11A0A075B6L2 103 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 GLOD5A6NK44 160 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 F5H697 171 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 O00370 1275 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 CTDSP2O14595 271 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TO15178 435 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 KCNQ3O43525 872 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 AKAP8O43823 692 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 RANBP6O60518 1105 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 TACC1O75410 805 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ZFPL1O95159 310 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 PENKP01210 267 aaPredicted RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 C1SP09871 688 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 DLATP10515 647 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 MCM3P25205 808 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 PTBP1P26599 531 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS41-212ENST00000482217 ZFP36P26651 326 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 ACVR2AP27037 513 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 CHRNA3P32297 505 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 MC5RP33032 325 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 HNF1BP35680 557 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ACVRL1P37023 503 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 HAAOP46952 286 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 VCPP55072 806 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 LILRA4P59901 499 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 MYL6P60660 151 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 SARNPP82979 210 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 GUCY1B3Q02153 619 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 TUBB3Q13509 450 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 RAPSNQ13702 412 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 LAMB3Q13751 1172 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ARHGEF7Q14155 803 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 CLCA4Q14CN2 919 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 VEPH1Q14D04 833 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 KARSQ15046 597 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 RPS6KA1Q15418 735 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 CEBPEQ15744 281 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 NTRK2Q16620 822 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 FUT11Q495W5 492 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 GALNTL6Q49A17 601 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TIGD2Q4W5G0 525 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ARL6IP4Q66PJ3 421 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 TMEM108Q6UXF1 575 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 PIK3AP1Q6ZUJ8 805 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 KRT28Q7Z3Y7 464 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TAF8Q7Z7C8 310 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ARHGEF19Q8IW93 802 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 CCDC105Q8IYK2 499 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 FAM109AQ8N4B1 249 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 SYT2Q8N9I0 419 aaPredicted RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 FAM184AQ8NB25 1140 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 OR9A1PQ8NGU1 263 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 OR2T34Q8NGX1 318 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TEKT4Q8WW24 435 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 RAPGEF4Q8WZA2 1011 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 KAT2AQ92830 837 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 HAS1Q92839 578 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TMEM125Q96AQ2 219 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ZNF503Q96F45 646 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 PIWIL1Q96J94 861 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 LINC00615Q96LM1 132 aaPredicted RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 CCDC77Q9BR77 488 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 GPR61Q9BZJ8 451 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TRIM2Q9C040 744 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 SMOC2Q9H3U7 446 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 FAM83DQ9H4H8 585 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 SYNDIG1Q9H7V2 258 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TTC12Q9H892 705 aaPredicted RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 UNKLQ9H9P5 680 aaKnown RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 VEZTQ9HBM0 779 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS41-212ENST00000482217 CENPMQ9NSP4 180 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 KLHL9Q9P2J3 617 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 ZNF70Q9UC06 446 aaPredicted RBP4.2□□□□□ -1.74
VPS41-212ENST00000482217 MID2Q9UJV3 735 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 SARDHQ9UL12 918 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 CAPN11Q9UMQ6 739 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms