RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SLCO1B7G3V0H7 640 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 PSMD12O00232 456 aaPredicted RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 RAMP2O60895 175 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 OAZ2O95190 189 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 CKBP12277 381 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 PFKFB4Q16877 469 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 NADK2Q4G0N4 442 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 REP15Q6BDI9 236 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 RGMBQ6NW40 437 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 RNF19BQ6ZMZ0 732 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 TAS1R1Q7RTX1 841 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 TMEM173Q86WV6 379 aaPredicted RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 TTC16Q8NEE8 873 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 ESAMQ96AP7 390 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 MPP4Q96JB8 637 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 ZBED2Q9BTP6 218 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 TRIM62Q9BVG3 475 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS52-217ENST00000478934 CACNA2D2Q9NY47 1150 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 C6orf203Q9P0P8 240 aaPredicted RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 FAM50BQ9Y247 325 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 TBC1D30Q9Y2I9 924 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 C7orf72A4D263 438 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 TRPC5OSA6NMA1 111 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 WASH4PA8MWX3 477 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 GPR39O43194 453 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 GPC4O75487 556 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 CLPTM1O96005 669 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 CHRM3P20309 590 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 CLCN5P51795 746 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 NDST2P52849 883 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 DSC1Q08554 894 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 ZNF678Q5SXM1 525 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 MAP3K21Q5TCX8 1036 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 ARMC3Q5W041 872 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 CHSY3Q70JA7 882 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 FUNDC1Q8IVP5 155 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 MYO1HQ8N1T3 1032 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 PTGR2Q8N8N7 351 aaPredicted RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 EME1Q96AY2 570 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 ZNF512Q96ME7 567 aaPredicted RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 MRPL1Q9BYD6 325 aaKnown RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 MEAF6Q9HAF1 191 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.82□□□□□ -0.681e-7■■■□□ 19.2
VPS52-217ENST00000478934 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
VPS52-217ENST00000478934 BTRCQ9Y297 605 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 SPO11Q9Y5K1 396 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 SNX13Q9Y5W8 968 aa10.82□□□□□ -0.68
VPS52-217ENST00000478934 LOC285095A0A1B0GVY8 99 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 NCF1BA6NI72 391 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 NCF1CA8MVU1 366 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 CD3EAPO15446 510 aaKnown RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 BCAS2O75934 225 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 PABPC4LP0CB38 370 aaKnown RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 SLC2A3P11169 496 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 NCF1P14598 390 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 UGT1A6P19224 532 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 SLC6A4P31645 630 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 DUSP4Q13115 394 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 SERINC3Q13530 473 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 LRP8Q14114 963 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 GRB7Q14451 532 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 ACAP2Q15057 778 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 KLC3Q6P597 504 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 TRAF7Q6Q0C0 670 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 SCIMPQ6UWF3 145 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 KIAA0408Q6ZU52 694 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 RETREG3Q86VR2 466 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 CCDC117Q8IWD4 279 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 DCBLD1Q8N8Z6 715 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 DIS3LQ8TF46 1054 aaKnown RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 UROC1Q96N76 676 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 CIB1Q99828 191 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 SPON2Q9BUD6 331 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 COQ10BQ9H8M1 238 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 HEMK1Q9Y5R4 338 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 DNAJC15Q9Y5T4 150 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 UBA6A0AVT1 1052 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 KIF3CO14782 793 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 VILLO15195 856 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 WISP3O95389 354 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 CD1DP15813 335 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 RPL17P18621 184 aaKnown RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 IMPDH1P20839 514 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 FMO4P31512 558 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 POLD2P49005 469 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 RPS24P62847 133 aaKnown RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 UGT3A2Q3SY77 523 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 MTX3Q5HYI7 312 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 MSANTD2Q6P1R3 559 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 LCA5Q86VQ0 697 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 DCP1BQ8IZD4 617 aaKnown RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 LGI2Q8N0V4 545 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 TEX26Q8N6G2 289 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 TMEM102Q8N9M5 508 aaPredicted RBP10.81□□□□□ -0.68
VPS52-217ENST00000478934 TRPC4APQ8TEL6 797 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 ZFAND2BQ8WV99 257 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 LPGAT1Q92604 370 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms