RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 GDPD5Q8WTR4 605 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 CKAP2Q8WWK9 683 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 SMARCD2Q92925 531 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 HGH1Q9BTY7 390 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ABCG8Q9H221 673 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 Q9H521 79 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 USP3Q9Y6I4 520 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 LATS1O95835 1130 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 IL1RL1Q01638 556 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 SLC1A5Q15758 541 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 PIWIL4Q7Z3Z4 852 aaKnown RBP12.03□□□□□ -0.48
PCCB-214ENST00000478469 SPATA24Q86W54 205 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ATL1Q8WXF7 558 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 NSL1Q96IY1 281 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 TMEM120AQ9BXJ8 343 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 NSUN3Q9H649 340 aaKnown RBP12.03□□□□□ -0.48
PCCB-214ENST00000478469 TCF7L2Q9NQB0 619 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 F5P12259 2224 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 TTC24A2A3L6 582 aaPredicted RBP12.03□□□□□ -0.48
PCCB-214ENST00000478469 E9PBE3 544 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 H0Y3Z8 333 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 KLHL41O60662 606 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 SEC24AO95486 1093 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 VAV1P15498 845 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 IFNA8P32881 189 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 LIMK2P53671 638 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ATXN3P54252 364 aaPredicted RBP12.03□□□□□ -0.48
PCCB-214ENST00000478469 GRM2Q14416 872 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 PITRM1Q5JRX3 1037 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 HECTD2Q5U5R9 776 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 CNSTQ6PJW8 725 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ARHGAP36Q6ZRI8 547 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 TMEM173Q86WV6 379 aaPredicted RBP12.03□□□□□ -0.48
PCCB-214ENST00000478469 SCML4Q8N228 414 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 LINGO1Q96FE5 620 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 TMEM109Q9BVC6 243 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 VTI1BQ9UEU0 232 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 RABGEF1Q9UJ41 708 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ZNF180Q9UJW8 692 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ANGPTL2Q9UKU9 493 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 DLDP09622 509 aaKnown RBP12.03□□□□□ -0.48
PCCB-214ENST00000478469 MPP1Q00013 466 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 KCNJ11Q14654 390 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ITPRIPL2Q3MIP1 535 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 VITQ6UXI7 678 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ZNF783Q6ZMS7 281 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 C11orf96Q7Z7L8 435 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 SPATA6LQ8N4H0 392 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 LMAN2LQ9H0V9 348 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 GID8Q9NWU2 228 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 GPSM3Q9Y4H4 160 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 LTBP1Q14766 1721 aa12.03□□□□□ -0.48
PCCB-214ENST00000478469 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.48
PCCB-214ENST00000478469 CPA2P48052 419 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 DPYSQ14117 519 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 RAB41Q5JT25 222 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 CCSAPQ6IQ19 270 aaPredicted RBP12.02□□□□□ -0.48
PCCB-214ENST00000478469 RNF217Q8TC41 542 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 CDCA3Q99618 268 aaPredicted RBP12.02□□□□□ -0.48
PCCB-214ENST00000478469 RBBP8Q99708 897 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 YIPF2Q9BWQ6 316 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 LOXHD1Q8IVV2 1947 aa12.02□□□□□ -0.48
PCCB-214ENST00000478469 CXCL10P02778 98 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 PCNAP12004 261 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 MAPK1P28482 360 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 IRF8Q02556 426 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 PTK2BQ14289 1009 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 ITIH4Q14624 930 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 SPDYE7PQ495Y7 208 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 KIAA0319Q5VV43 1072 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 KLHDC10Q6PID8 442 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 CRTC3Q6UUV7 619 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 LAYNQ6UX15 382 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
PCCB-214ENST00000478469 CENPTQ96BT3 561 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 FEM1AQ9BSK4 669 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.49
PCCB-214ENST00000478469 HSFX1Q9UBD0 423 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 ZNF839A8K0R7 811 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 HEPACAM2A8MVW5 462 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 SLC35G4P0C7Q5 338 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 TIE1P35590 1138 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 COPAP53621 1224 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 PRKD1Q15139 912 aaPredicted RBP12.02□□□□□ -0.49
PCCB-214ENST00000478469 TCEA2Q15560 299 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 RALGPS1Q5JS13 557 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 LRRC73Q5JTD7 316 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 C22orf39Q6P5X5 142 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 RAVER1Q8IY67 606 aaKnown RBP12.02□□□□□ -0.49
PCCB-214ENST00000478469 RFWD2Q8NHY2 731 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 PSKH2Q96QS6 385 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 THTPAQ9BU02 230 aa12.02□□□□□ -0.49
PCCB-214ENST00000478469 ASPSCR1Q9BZE9 553 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms