RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TADA1Q96BN2 335 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 NUS1Q96E22 293 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 DTD2Q96FN9 168 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 CNDP2Q96KP4 475 aaKnown RBP15.6■□□□□ 0.09
HMGA1-206ENST00000478214 FAM118BQ9BPY3 351 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 TCEAL2Q9H3H9 227 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-206ENST00000478214 TOR4AQ9NXH8 423 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 UBP1Q9NZI7 540 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 KLHL8Q9P2G9 620 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-206ENST00000478214 RPL26L1Q9UNX3 145 aaKnown RBP15.6■□□□□ 0.09
HMGA1-206ENST00000478214 WASF3Q9UPY6 502 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 LRRK1Q38SD2 2015 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 SPEGQ15772 3267 aa15.6■□□□□ 0.09
HMGA1-206ENST00000478214 CEP295Q9C0D2 2601 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 CAPN8A6NHC0 703 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 H3BM21 787 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 K7ESM1 405 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 PSMD11O00231 422 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ENC1O14682 589 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 FFAR2O15552 330 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 MT-CYBP00156 380 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-206ENST00000478214 GIMD1P0DJR0 217 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 NFKB1P19838 968 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 SPINK2P20155 84 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 RBL1P28749 1068 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 PTSQ03393 145 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 DNAJC3Q13217 504 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 XRCC4Q13426 336 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 GALNT3Q14435 633 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 NFATC4Q14934 902 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 PCSK7Q16549 785 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ESRP1Q6NXG1 681 aaKnown RBP15.59■□□□□ 0.09
HMGA1-206ENST00000478214 PNCKQ6P2M8 343 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ENPP7Q6UWV6 458 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 TECPR1Q7Z6L1 1165 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 PHACTR4Q8IZ21 702 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ZNF567Q8N184 647 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 CHCHD4Q8N4Q1 142 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ZNF548Q8NEK5 533 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-206ENST00000478214 FUBP1Q96AE4 644 aaKnown RBP15.59■□□□□ 0.09
HMGA1-206ENST00000478214 HES6Q96HZ4 224 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 TRIB3Q96RU7 358 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ANGPTL2Q9UKU9 493 aa15.59■□□□□ 0.09
HMGA1-206ENST00000478214 APOBEC2Q9Y235 224 aaKnown RBP15.59■□□□□ 0.09
HMGA1-206ENST00000478214 ARID1BQ8NFD5 2236 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 ANKRD66B4E2M5 251 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 F5H423 210 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 SIGLEC6O43699 453 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 HYAL3O43820 417 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 PMPCBO75439 489 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 TJP3O95049 919 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 TRIM16O95361 564 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 CLDN7O95471 211 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 C1SP09871 688 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 CCDC175P0C221 793 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 HTR1BP28222 390 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 TRIM23P36406 574 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 STC1P52823 247 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 EIF3EP60228 445 aaKnown RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 PPARDQ03181 441 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 CDK18Q07002 472 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 C1orf61Q13536 156 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 SLC14A2Q15849 920 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 ALG11Q2TAA5 492 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 CCDC157Q569K6 752 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 FAXCQ5TGI0 409 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 KCTD16Q68DU8 428 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 PID1Q7Z2X4 250 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 OR4C6Q8NH72 309 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 LMX1AQ8TE12 382 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 TSACCQ96A04 125 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 LYSMD1Q96S90 227 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 MLPHQ9BV36 600 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 LGR4Q9BXB1 951 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 ADGRE3Q9BY15 652 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 LZTFL1Q9NQ48 299 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 KCTD5Q9NXV2 234 aa15.58■□□□□ 0.08
HMGA1-206ENST00000478214 APOBEC3BQ9UH17 382 aaKnown RBP15.58■□□□□ 0.08
HMGA1-206ENST00000478214 NEMP2A6NFY4 417 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 TMEM202A6NGA9 273 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 CACNB4O00305 520 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-206ENST00000478214 SCAMP1O15126 338 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 AQP9O43315 295 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 PIRTP0C851 137 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 RBP3P10745 1247 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 ZNF30P17039 623 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 KIAA1024LP59773 190 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 SHC2P98077 582 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 CDKN3Q16667 212 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 PROX2Q3B8N5 592 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 PRRT3Q5FWE3 981 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 ZNF662Q6ZS27 426 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 RAB44Q7Z6P3 723 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-206ENST00000478214 HID1Q8IV36 788 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 CDKL3Q8IVW4 592 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-206ENST00000478214 BTN2A2Q8WVV5 523 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 ADAMTS14Q8WXS8 1223 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 OXNAD1Q96HP4 312 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-206ENST00000478214 WDR92Q96MX6 357 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 VAT1Q99536 393 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms