RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 RNF10Q8N5U6 811 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 CCDC112Q8NEF3 446 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 KIAA1524Q8TCG1 905 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 VAT1Q99536 393 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 LRRC61Q9BV99 259 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 GOLPH3Q9H4A6 298 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 NCKIPSDQ9NZQ3 722 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 PCDHA3Q9Y5H8 950 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 RAI2Q9Y5P3 530 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 KNTC1P50748 2209 aa13.84□□□□□ -0.19
SOX2-OT-208ENST00000477928 TDRD6O60522 2096 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 HACD1B0YJ81 288 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 AQP9O43315 295 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PYGLP06737 847 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PDHA1P08559 390 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 CTPS1P17812 591 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 LHCGRP22888 699 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 KELP23276 732 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 THOP1P52888 689 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 NAP1L1P55209 391 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 DAB2P98082 770 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 INSM1Q01101 510 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 DSC2Q02487 901 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 CYP4F3Q08477 520 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 TARDBPQ13148 414 aaKnown RBP eCLIP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 XRCC4Q13426 336 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 ARHGEF7Q14155 803 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 CDKN3Q16667 212 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 ALG11Q2TAA5 492 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PRRT3Q5FWE3 981 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 DENND2CQ68D51 928 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 CRTC1Q6UUV9 634 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 TSPAN33Q86UF1 283 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PROSER1Q86XN7 944 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 CBARPQ8N350 705 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 ARRDC2Q8TBH0 407 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PIH1D2Q8WWB5 315 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 P3H4Q92791 437 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 LYSMD1Q96S90 227 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 SRPK1Q96SB4 655 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 FERMT1Q9BQL6 677 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 TDRD1Q9BXT4 1180 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 TSGA10Q9BZW7 698 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 NLGN3Q9NZ94 848 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 APOBEC3BQ9UH17 382 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 RAXQ9Y2V3 346 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 HEY1Q9Y5J3 304 aa13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 GOLGA4Q13439 2230 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 ANKRD11Q6UB99 2663 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-208ENST00000477928 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 hCG_1818297A0A087WSY0 165 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 A0A0J9YYE9 177 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TMEM8BA6NDV4 472 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TPP1O14773 563 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 CST8O60676 142 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 HEXIM1O94992 359 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TRBC1P01850 177 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 HLA-DQB2P05538 268 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 ALPIP09923 528 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TNNT1P13805 278 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TSHRP16473 764 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 ACP1P24666 158 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TRIM23P36406 574 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 RWDD2BP57060 319 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 KIAA1024LP59773 190 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 NIPAL4Q0D2K0 466 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 AP1B1Q10567 949 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 CNGA3Q16281 694 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TEX44Q53QW1 395 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 GUSBP11Q6P575 273 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 NPNTQ6UXI9 565 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 RD3Q7Z3Z2 195 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 HSD11B1LQ7Z5J1 315 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 HID1Q8IV36 788 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 GALNT15Q8N3T1 639 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 TFB1MQ8WVM0 346 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 OR1E3Q8WZA6 343 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 PDXPQ96GD0 296 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 LGMNQ99538 433 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 APOOQ9BUR5 198 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 LGR4Q9BXB1 951 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 MRPL40Q9NQ50 206 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 SPASTQ9UBP0 616 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 PCDHB1Q9Y5F3 818 aa13.82□□□□□ -0.2
SOX2-OT-208ENST00000477928 APC2O95996 2303 aa13.81□□□□□ -0.2
SOX2-OT-208ENST00000477928 RGSL1A5PLK6 1076 aa13.81□□□□□ -0.2
SOX2-OT-208ENST00000477928 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms