RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 NCKIPSDQ9NZQ3 722 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 LNPEPQ9UIQ6 1025 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 GGT7Q9UJ14 662 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 ZFP69BQ9UJL9 534 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 SLC25A13Q9UJS0 675 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 APPL1Q9UKG1 709 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 RUVBL2Q9Y230 463 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 CHKBQ9Y259 395 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 PCDHB1Q9Y5F3 818 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 SHROOM3Q8TF72 1996 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 DNAH12Q6ZR08 3092 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 A0A0G2JND7 137 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 CCDC162PA2VCL2 907 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 HIDE1A8MVS5 230 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 TARM1B6A8C7 271 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 G3V2L1 256 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 H3BMM5 538 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 GOLGA8TH3BQL2 631 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SLC22A2O15244 555 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SNAP91O60641 907 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 HAUS5O94927 633 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 HSPA4LO95757 839 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ESR1P03372 595 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ASLP04424 464 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 PRKCGP05129 697 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SERPINA6P08185 405 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 FDXRP22570 491 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 GLDCP23378 1020 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ADSLP30566 484 aaPredicted RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 NNMTP40261 264 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 PTGER3P43115 390 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 LIG3P49916 1009 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ATP6V0D1P61421 351 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 POLR2LP62875 67 aaKnown RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 ZXDBP98169 803 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 NFKB2Q00653 900 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 CACNG1Q06432 222 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 LMAN2Q12907 356 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 TRAF2Q12933 501 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 GALNT3Q14435 633 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 IHHQ14623 411 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 E2F5Q15329 346 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ZNF77Q15935 545 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 GPR33Q49SQ1 333 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 FSCBQ5H9T9 825 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 PRSS36Q5K4E3 855 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 C16orf46Q6P387 395 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 CNSTQ6PJW8 725 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 CLNKQ7Z7G1 428 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SLC41A1Q8IVJ1 513 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ARID3BQ8IVW6 561 aaPredicted RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 RAVER1Q8IY67 606 aaKnown RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 AHI1Q8N157 1196 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 MICALL1Q8N3F8 863 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 FSTL5Q8N475 847 aaPredicted RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 NKAPQ8N5F7 415 aaKnown RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 CELF5Q8N6W0 485 aaKnown RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 ZNF454Q8N9F8 522 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 LPCAT1Q8NF37 534 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 OR2AP1Q8NGE2 309 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 RHEBL1Q8TAI7 183 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 DTX3LQ8TDB6 740 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 HCAR2Q8TDS4 363 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 IRF7Q92985 503 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 WBP2Q969T9 261 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SKA1Q96BD8 255 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 KLHL29Q96CT2 875 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ATXN7L3BQ96GX2 97 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 MYO19Q96H55 970 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 LRIG1Q96JA1 1093 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SCYL1Q96KG9 808 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 CNDP1Q96KN2 507 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 LMLNQ96KR4 655 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 RMDN2Q96LZ7 410 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 GPR78Q96P69 363 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 MECRQ9BV79 373 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 TMEM120AQ9BXJ8 343 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 DRC3Q9H069 523 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ZMYND15Q9H091 742 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 C12orf65Q9H3J6 166 aaKnown RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 EML4Q9HC35 981 aaKnown RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 GPAMQ9HCL2 828 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 FBXO6Q9NRD1 293 aaPredicted RBP7.94□□□□□ -1.14
VMA21-203ENST00000477649 RAD18Q9NS91 495 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 DZANK1Q9NVP4 752 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 OBP2AQ9NY56 170 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 TAS2R13Q9NYV9 303 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 HEY2Q9UBP5 337 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 PPIL1Q9Y3C6 166 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 RAP2CQ9Y3L5 183 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 ARL5AQ9Y689 179 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 CAPN7Q9Y6W3 813 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 PLXNA4Q9HCM2 1894 aa7.94□□□□□ -1.14
VMA21-203ENST00000477649 SZT2Q5T011 3432 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 CCDC78A2IDD5 438 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 LCHNA4D1U4 455 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 SYCE1LA8MT33 242 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 WASH3PC4AMC7 463 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PHGDHO43175 533 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 SMIM24O75264 130 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms