RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TMEM52BQ4KMG9 183 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 TEX35Q5T0J7 233 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 SEL1L3Q68CR1 1132 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 KIAA0895LQ68EN5 471 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 DENND5AQ6IQ26 1287 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 ZNF534Q76KX8 674 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 GLT6D1Q7Z4J2 308 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 PCGF5Q86SE9 256 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 HOOK3Q86VS8 718 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 TRIM69Q86WT6 500 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 HORMAD1Q86X24 394 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 NAT8LQ8N9F0 302 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 SNX19Q92543 992 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 PCED1AQ9H1Q7 454 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 ARNT2Q9HBZ2 717 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 CASS4Q9NQ75 786 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 HACD3Q9P035 362 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 SNX24Q9Y343 169 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 PLXNB3Q9ULL4 1909 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 RALGAPA1Q6GYQ0 2036 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 A0A0U1RQS6 177 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 NDC80O14777 642 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 MMP20O60882 483 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 LILRB5O75023 590 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 FSBPO95073 299 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 ZNF30P17039 623 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 MAT2AP31153 395 aaKnown RBP15.34■□□□□ 0.05
SEC13-215ENST00000477547 LIG3P49916 1009 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 ITGA8P53708 1063 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 RPS21P63220 83 aaKnown RBP15.34■□□□□ 0.05
SEC13-215ENST00000477547 SARNPP82979 210 aaKnown RBP15.34■□□□□ 0.05
SEC13-215ENST00000477547 CALCOCO2Q13137 446 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 SEPT6Q14141 434 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 MORF4L2Q15014 288 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 TMEM259Q4ZIN3 620 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 DENND2CQ68D51 928 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 NEK5Q6P3R8 708 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 CRTC1Q6UUV9 634 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 LIPIQ6XZB0 460 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 LPCAT2Q7L5N7 544 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 DEFB119Q8N690 84 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 BBOF1Q8ND07 529 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 HSPA12BQ96MM6 686 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 SRPK1Q96SB4 655 aaKnown RBP15.34■□□□□ 0.05
SEC13-215ENST00000477547 GPR63Q9BZJ6 419 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 EPC1Q9H2F5 836 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 MAGEE1Q9HCI5 957 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 ZFR2Q9UPR6 939 aaKnown RBP15.34■□□□□ 0.05
SEC13-215ENST00000477547 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.34■□□□□ 0.05
SEC13-215ENST00000477547 COQ6Q9Y2Z9 468 aa15.34■□□□□ 0.05
SEC13-215ENST00000477547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 ESYT3A0FGR9 886 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 PSMD11O00231 422 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 HRO43593 1189 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 IGHV4-34P06331 123 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 C1SP09871 688 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 TPH1P17752 444 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 CCR5P51681 352 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 MTM1Q13496 603 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 POU6F1Q14863 301 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 ACOX1Q15067 660 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 ELF2Q15723 593 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 GLE1Q53GS7 698 aaKnown RBP15.33■□□□□ 0.04
SEC13-215ENST00000477547 PPM1JQ5JR12 505 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 PMS2CLQ68D20 193 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 DUPD1Q68J44 220 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 HIBCHQ6NVY1 386 aaPredicted RBP15.33■□□□□ 0.04
SEC13-215ENST00000477547 PRR23BQ6ZRT6 265 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 TMEFF1Q8IYR6 380 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 MCUQ8NE86 351 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 KLK6Q92876 244 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 SERPINB12Q96P63 405 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 TRABDQ9H4I3 376 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 XAB2Q9HCS7 855 aaKnown RBP15.33■□□□□ 0.04
SEC13-215ENST00000477547 WHRNQ9P202 907 aa15.33■□□□□ 0.04
SEC13-215ENST00000477547 SDK1Q7Z5N4 2213 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 BAHCC1Q9P281 2608 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 IGLON5A6NGN9 336 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 SMAPO00193 183 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 AP3B1O00203 1094 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 LATO43561 262 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 LZTS3O60299 673 aaPredicted RBP15.32■□□□□ 0.04
SEC13-215ENST00000477547 TM7SF2O76062 418 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
SEC13-215ENST00000477547 CLDN7O95471 211 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 STC1P52823 247 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 SESN2P58004 480 aaPredicted RBP15.32■□□□□ 0.04
SEC13-215ENST00000477547 GUCY2DQ02846 1103 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 SIM2Q14190 667 aaPredicted RBP15.32■□□□□ 0.04
SEC13-215ENST00000477547 ZNF284Q2VY69 593 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 SETMARQ53H47 684 aaPredicted RBP15.32■□□□□ 0.04
SEC13-215ENST00000477547 LRRC8BQ6P9F7 803 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 HSD11B1LQ7Z5J1 315 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 SLC41A1Q8IVJ1 513 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 TTC30BQ8N4P2 665 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 CADM4Q8NFZ8 388 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 FOXJ1Q92949 421 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 BIRC7Q96CA5 298 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 DUSP15Q9H1R2 295 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms