RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 KBTBD7Q8WVZ9 684 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 SAMHD1Q9Y3Z3 626 aaKnown RBP18.6■□□□□ 0.57
VARS2-209ENST00000477288 CCNDBP1O95273 360 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 GIMD1P0DJR0 217 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 ATP13A4Q4VNC1 1196 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 ULK3Q6PHR2 472 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 TTPALQ9BTX7 342 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 PRDM12Q9H4Q4 367 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 CLEC4AQ9UMR7 237 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 H3BNH8 94 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 LIASO43766 372 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 IGFALSP35858 605 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 OR10H5Q8NGA6 315 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 OR4L1Q8NH43 312 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 CD101Q93033 1021 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 MYO19Q96H55 970 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 MCMBPQ9BTE3 642 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 SPAG4Q9NPE6 437 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 PLK2Q9NYY3 685 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 KCNE2Q9Y6J6 123 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 RPTORQ8N122 1335 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 BSNDQ8WZ55 320 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 FAM105AQ9NUU6 356 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 ZNF214Q9UL59 606 aaPredicted RBP18.6■□□□□ 0.57
VARS2-209ENST00000477288 TRBV23OR9-2A0A075B6M9 112 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 GRM6O15303 877 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 KELP23276 732 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 SLC26A3P40879 764 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 DUSP4Q13115 394 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 NR1D2Q14995 579 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 MED22Q15528 200 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 ADAMTSL2Q86TH1 951 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 COPS8Q99627 209 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 TLR10Q9BXR5 811 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 EQTNQ9NQ60 294 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 MRPS33Q9Y291 106 aaKnown RBP18.59■□□□□ 0.57
VARS2-209ENST00000477288 HAT1O14929 419 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 ZBTB11O95625 1053 aaPredicted RBP18.59■□□□□ 0.57
VARS2-209ENST00000477288 ELNP15502 786 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 CHN2P52757 468 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 MRPS5P82675 430 aaKnown RBP18.59■□□□□ 0.57
VARS2-209ENST00000477288 ST3GAL1Q11201 340 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 CTBP1Q13363 440 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 CHID1Q9BWS9 393 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 SMCO1Q147U7 214 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 LSM12Q3MHD2 195 aaKnown RBP18.59■□□□□ 0.57
VARS2-209ENST00000477288 FAM35AQ86V20 835 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 SLC47A1Q96FL8 570 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 LGMNQ99538 433 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 MRPL45Q9BRJ2 306 aaKnown RBP18.59■□□□□ 0.57
VARS2-209ENST00000477288 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 CERS4Q9HA82 394 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 GDF3Q9NR23 364 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 SERPINB7O75635 380 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 CYP1A2P05177 515 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 GLUD2P49448 558 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 GTF2BQ00403 316 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 AMER2Q8N7J2 671 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 VANGL1Q8TAA9 524 aaPredicted RBP18.59■□□□□ 0.57
VARS2-209ENST00000477288 KLHL5Q96PQ7 755 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 ZNF607Q96SK3 696 aa18.59■□□□□ 0.57
VARS2-209ENST00000477288 RPL22P35268 128 aaKnown RBP18.58■□□□□ 0.57
VARS2-209ENST00000477288 CDK18Q07002 472 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 ABRAXAS1Q6UWZ7 409 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 PTCHD4Q6ZW05 846 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 TMEM161BQ8NDZ6 487 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 PIWIL2Q8TC59 973 aaKnown RBP18.58■□□□□ 0.57
VARS2-209ENST00000477288 RASSF1Q9NS23 344 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 TRMT13Q9NUP7 481 aaKnown RBP18.58■□□□□ 0.57
VARS2-209ENST00000477288 C15orf41Q9Y2V0 281 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 POLR3HQ9Y535 204 aaPredicted RBP18.58■□□□□ 0.57
VARS2-209ENST00000477288 UBIAD1Q9Y5Z9 338 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 PTCH2Q9Y6C5 1203 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 A0A1W2PRG6 482 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 OR6C75A6NL08 312 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 FGF19O95750 216 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 HOXA10P31260 410 aaPredicted RBP18.58■□□□□ 0.57
VARS2-209ENST00000477288 B3GNT6Q6ZMB0 384 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 GPR180Q86V85 440 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 MCEMP1Q8IX19 187 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 ATP6V1C2Q8NEY4 427 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 EMID1Q96A84 441 aaPredicted RBP18.58■□□□□ 0.57
VARS2-209ENST00000477288 GPER1Q99527 375 aa18.58■□□□□ 0.57
VARS2-209ENST00000477288 A0A1W2PQH9 124 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 YDJCA8MPS7 323 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 RFXANKO14593 260 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 FLT3LGP49771 235 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 TAPT1Q6NXT6 567 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 UBE2R2Q712K3 238 aaPredicted RBP18.58■□□□□ 0.56
VARS2-209ENST00000477288 OAFQ86UD1 273 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 RBFAQ8N0V3 343 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 ALLCQ8N6M5 410 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 HDAC10Q969S8 669 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 PPCDCQ96CD2 204 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 C3orf18Q9UK00 162 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 MROH1Q8NDA8 1641 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 LRRC17Q8N6Y2 441 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 VGLL2Q8N8G2 317 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 TSPAN14Q8NG11 270 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 ZHX1-C8orf76Q96EF9 292 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms