RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 MMP13P45452 471 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 SERPINH1P50454 418 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 RENBPP51606 427 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 GEMIN4P57678 1058 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 RPS14P62263 151 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 MRPS25P82663 173 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 DAB2P98082 770 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 SLC20A2Q08357 652 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 ZNF235Q14590 738 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 CYTH1Q15438 398 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 TRIP13Q15645 432 aaPredicted RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 FNDC3BQ53EP0 1204 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 MARC1Q5VT66 337 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 CDCP2Q5VXM1 449 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 ZNF567Q8N184 647 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 SH2D3CQ8N5H7 860 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 ATP11CQ8NB49 1132 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 GLIS1Q8NBF1 620 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 GRK7Q8WTQ7 553 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 MRGPRX3Q96LB0 322 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 RUNDC3BQ96NL0 473 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 AGAP3Q96P47 875 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 IL12RB2Q99665 862 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 FERMT1Q9BQL6 677 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 NT5MQ9NPB1 228 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.55
LSM2-212ENST00000477182 KLHL8Q9P2G9 620 aaPredicted RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 SLCO3A1Q9UIG8 710 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 HS3ST2Q9Y278 367 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 FCF1Q9Y324 198 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 CREBBPQ92793 2442 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 A0A1W2PR77 199 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 C5orf60A6NFR6 353 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 FAM47DPA6NHR8 397 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 LRRC72A6NJI9 287 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 TTI1O43156 1089 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 RAD51CO43502 376 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 MAGEC1O60732 1142 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 ZNF189O75820 626 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 GAS8O95995 478 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 KRT14P02533 472 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 HLA-DQB2P05538 268 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 SRPRAP08240 638 aaKnown RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 ZSCAN5DPP0CG00 497 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 MYF5P13349 255 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 CR2P20023 1033 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 NXPH1P58417 271 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 RHOAP61586 193 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 SKOR1P84550 965 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 DR1Q01658 176 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 RFTN1Q14699 578 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 ACCSLQ4AC99 568 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 TEX44Q53QW1 395 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 INO80DQ53TQ3 878 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 ANKRD20A2Q5SQ80 823 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 ANKRD20A1Q5TYW2 823 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 ANKRD20A3Q5VUR7 823 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 ZNF776Q68DI1 518 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 KANSL1Q7Z3B3 1105 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 PGBD5Q8N414 524 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 MMGT1Q8N4V1 131 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 TAB3Q8N5C8 712 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
LSM2-212ENST00000477182 TEX26Q8N6G2 289 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 CNTD1Q8N815 330 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 CCDC89Q8N998 374 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 TSEN2Q8NCE0 465 aaKnown RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 GANCQ8TET4 914 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 CASKIN2Q8WXE0 1202 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 SLCO2A1Q92959 643 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 RTP4Q96DX8 246 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 MYO19Q96H55 970 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 EXOC2Q96KP1 924 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 SPATA13Q96N96 652 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 SEMA3CQ99985 751 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 TRIM51Q9BSJ1 452 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 CINPQ9BW66 212 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 TMEM245Q9H330 911 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 LHX3Q9UBR4 397 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 FEZ2Q9UHY8 353 aaPredicted RBP11.63□□□□□ -0.55
LSM2-212ENST00000477182 TTLL3Q9Y4R7 772 aa11.63□□□□□ -0.55
LSM2-212ENST00000477182 CXorf51AA0A1B0GTR3 108 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 TTC34A8MYJ7 566 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 F5H423 210 aaPredicted RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 MUSKO15146 869 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ATP9BO43861 1147 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 OPA1O60313 960 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 CSO75390 466 aaKnown RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 GCATO75600 419 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 SLU7O95391 586 aaKnown RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 ITGB2P05107 769 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 CD68P34810 354 aaPredicted RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 RPL22P35268 128 aaKnown RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 NNMTP40261 264 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 RGRP47804 291 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms