RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SLC39A1Q9NY26 324 aa12.62□□□□□ -0.39
SKA3-206ENST00000475251 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
SKA3-206ENST00000475251 B3GALT1Q9Y5Z6 326 aa12.62□□□□□ -0.39
SKA3-206ENST00000475251 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
SKA3-206ENST00000475251 A0A1W2PQ67 120 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 ARHGAP42A6NI28 874 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 PES1O00541 588 aaKnown RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 TEX33O43247 280 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 BUB1BO60566 1050 aaPredicted RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 PRAMEF11O60813 436 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 PALMO75781 387 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 ECEL1O95672 775 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 FGF1P05230 155 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 THRAP10827 490 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 MAP4P27816 1152 aaKnown RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 CD1CP29017 333 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 NSFP46459 744 aaKnown RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 NDST2P52849 883 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 GPLD1P80108 840 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 SQSTM1Q13501 440 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 ACOX1Q15067 660 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 DPY19L2P1Q6NXN4 242 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 SCYL2Q6P3W7 929 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 CLEC18BQ6UXF7 455 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 ATCAYQ86WG3 371 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 ZSWIM9Q86XI8 627 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 NLGN4XQ8N0W4 816 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 NLGN4YQ8NFZ3 816 aaPredicted RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 ECHDC3Q96DC8 303 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 ZPBPQ9BS86 351 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 CINPQ9BW66 212 aaPredicted RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 LGR4Q9BXB1 951 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 MAGEB5Q9BZ81 275 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 GPN2Q9H9Y4 310 aaPredicted RBP12.61□□□□□ -0.39
SKA3-206ENST00000475251 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 TAAR2Q9P1P5 351 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 MAN2B2Q9Y2E5 1009 aa12.61□□□□□ -0.39
SKA3-206ENST00000475251 PRKCGP05129 697 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 CALB1P05937 261 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
SKA3-206ENST00000475251 ARSDP51689 593 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 TPI1P60174 286 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 NSUN2Q08J23 767 aaKnown RBP eCLIP12.6□□□□□ -0.39
SKA3-206ENST00000475251 RFTN1Q14699 578 aaPredicted RBP12.6□□□□□ -0.39
SKA3-206ENST00000475251 IGFBP7Q16270 282 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 MIIPQ5JXC2 388 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 TMEM71Q6P5X7 295 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 FAM129CQ86XR2 697 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 NRSN1Q8IZ57 195 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 APOBEC4Q8WW27 367 aaKnown RBP12.6□□□□□ -0.39
SKA3-206ENST00000475251 NUS1Q96E22 293 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 AHCYL2Q96HN2 611 aaKnown RBP12.6□□□□□ -0.39
SKA3-206ENST00000475251 TEX101Q9BY14 249 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 TRIT1Q9H3H1 467 aaKnown RBP12.6□□□□□ -0.39
SKA3-206ENST00000475251 LRRC19Q9H756 370 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 KCNK4Q9NYG8 393 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 ADAM22Q9P0K1 906 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 NOCTQ9UK39 431 aaKnown RBP12.6□□□□□ -0.39
SKA3-206ENST00000475251 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
SKA3-206ENST00000475251 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 EFCAB7A8K855 629 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 J3KR12 359 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 GFPT2O94808 682 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 GNPDA1P46926 289 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 PPM1FP49593 454 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 RENBPP51606 427 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 ZNF143P52747 638 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 AP1S1P61966 158 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 FMO1Q01740 532 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 CDC20Q12834 499 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 CRTC2Q53ET0 693 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 LACTB2Q53H82 288 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 PHLDB2Q86SQ0 1253 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 HEATR4Q86WZ0 1026 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 NRROSQ86YC3 692 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 TSEN2Q8NCE0 465 aaKnown RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 OR10G6Q8NH81 332 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 SLC30A5Q8TAD4 765 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 SLC20A1Q8WUM9 679 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 PMEPA1Q969W9 287 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 SP110Q9HB58 689 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 ZNF71Q9NQZ8 489 aaPredicted RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 DACH1Q9UI36 760 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 PILRAQ9UKJ1 303 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 FZD10Q9ULW2 581 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 SUFUQ9UMX1 484 aa12.59□□□□□ -0.39
SKA3-206ENST00000475251 ZFC3H1O60293 1989 aaKnown RBP12.59□□□□□ -0.39
SKA3-206ENST00000475251 SIGLEC16A6NMB1 481 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 CCP110O43303 1012 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms