RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 INO80DQ53TQ3 878 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 HIST2H2BCQ6DN03 193 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 GBP6Q6ZN66 633 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ARCQ7LC44 396 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ATCAYQ86WG3 371 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ZSWIM9Q86XI8 627 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 NRROSQ86YC3 692 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 FAM71AQ8IYT1 594 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CACNA2D3Q8IZS8 1091 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 EMC1Q8N766 993 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 TMEM35BQ8NCS4 154 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 OR56A4Q8NGH8 313 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 KIAA1524Q8TCG1 905 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 HCAR2Q8TDS4 363 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CASKIN2Q8WXE0 1202 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ART4Q93070 314 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 MIB2Q96AX9 1013 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 TBC1D31Q96DN5 1066 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 EXOC2Q96KP1 924 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 TIGD1Q96MW7 591 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 DDA1Q9BW61 102 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 MAGEB5Q9BZ81 275 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 KLC2Q9H0B6 622 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 DPEP2Q9H4A9 486 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 RETREG1Q9H6L5 497 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 WDR26Q9H7D7 661 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 SIX2Q9NPC8 291 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF71Q9NQZ8 489 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 SPATS2LQ9NUQ6 558 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 HOOK1Q9UJC3 728 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ATP8A1Q9Y2Q0 1164 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 DAAM1Q9Y4D1 1078 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ATP6V1DQ9Y5K8 247 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ANKRD36A6QL64 1941 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 HIVEP3Q5T1R4 2406 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PRSS38A1L453 326 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 GTPBP10A4D1E9 387 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CFAP69A5D8W1 941 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PRR19A6NJB7 356 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 RHPN2P1A8MT19 583 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 BIN1O00499 593 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CAPN5O15484 640 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 MTSS1O43312 755 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 WIPF1O43516 503 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 BUB1BO60566 1050 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 RECQL5O94762 991 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 LSM8O95777 96 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PRKCGP05129 697 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 FGF1P05230 155 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PLEKP08567 350 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 THRAP10827 490 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CCNB1P14635 433 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CYP11B1P15538 503 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 GM2AP17900 193 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 KELP23276 732 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 OAS2P29728 719 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CSTF2P33240 577 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 STAT1P42224 750 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 LIMK2P53671 638 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 HDAC4P56524 1084 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 BPIFB4P59827 614 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 NOMO3P69849 1222 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CDC20Q12834 499 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 RALGDSQ12967 914 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 TRA2AQ13595 282 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 GRM3Q14832 879 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CYTH1Q15438 398 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CDO1Q16878 200 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 C15orf59Q2T9L4 293 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CCDC14Q49A88 953 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 LACTB2Q53H82 288 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 TAF3Q5VWG9 929 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 NKAIN2Q5VXU1 208 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 DPY19L2P1Q6NXN4 242 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ERAP2Q6P179 960 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 BRAT1Q6PJG6 821 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 LIPIQ6XZB0 460 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF354CQ86Y25 554 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 DNAAF5Q86Y56 855 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ELOA2Q8IYF1 753 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PELI3Q8N2H9 469 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CCDC185Q8N715 623 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 RTL3Q8N8U3 475 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 BMPERQ8N8U9 685 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 AGBL5Q8NDL9 886 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CCDC112Q8NEF3 446 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 OR4D9Q8NGE8 314 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PRR7Q8TB68 274 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ZDHHC1Q8WTX9 485 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PATE1Q8WXA2 126 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ABHD17AQ96GS6 310 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 NCAPGQ9BPX3 1015 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 LGR4Q9BXB1 951 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ASPSCR1Q9BZE9 553 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 SPRY4Q9C004 299 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 SUV39H2Q9H5I1 410 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 CYP4F12Q9HCS2 524 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 METTL5Q9NRN9 209 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 OCIAD1Q9NX40 245 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC39A1Q9NY26 324 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms