RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SCML1Q9UN30 329 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 COQ6Q9Y2Z9 468 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 ZCWPW2A0A1B0GU75 182 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 NEMP1O14524 444 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 MMP20O60882 483 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 ALDH1A2O94788 518 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 ACSL3O95573 720 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 LPOP22079 712 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 LIG3P49916 1009 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 ARSDP51689 593 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 CLCN5P51795 746 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 UAP1Q16222 522 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 TMEM52BQ4KMG9 183 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 BEND6Q5SZJ8 279 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 LIPIQ6XZB0 460 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 CEP128Q6ZU80 1094 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 CBARPQ8N350 705 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 FRMD1Q8N878 549 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 TMEM105Q8N8V8 129 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 OR13J1Q8NGT2 312 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 OR14C36Q8NHC7 312 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 RAB7BQ96AH8 199 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 PBXIP1Q96AQ6 731 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 SUDS3Q9H7L9 328 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 MRM3Q9HC36 420 aaKnown RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 TREX1Q9NSU2 369 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 SPATA6Q9NWH7 488 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-203ENST00000471658 NCKAP1Q9Y2A7 1128 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 TTC28Q96AY4 2481 aa19.2■□□□□ 0.66
PSPC1-203ENST00000471658 PRR23AA6NEV1 266 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 K7ESF4 209 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 ERLIN1O75477 346 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 USP1O94782 785 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 APBB3O95704 486 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 TTC4O95801 387 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 GM2AP17900 193 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 HMGCLP35914 325 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 SUOXP51687 545 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 ELP6Q0PNE2 266 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 ARHGEF7Q14155 803 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 CRYMQ14894 314 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 MAP9Q49MG5 647 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 STEAP4Q687X5 459 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 TRMT10BQ6PF06 316 aaKnown RBP19.19■□□□□ 0.66
PSPC1-203ENST00000471658 TSSK4Q6SA08 328 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 C3orf62Q6ZUJ4 267 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 USP30Q70CQ3 517 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 RASSF3Q86WH2 238 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 STYXQ8WUJ0 223 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 PTCD2Q8WV60 388 aaKnown RBP19.19■□□□□ 0.66
PSPC1-203ENST00000471658 RLN3Q8WXF3 142 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 TBATAQ96M53 351 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 SRPK1Q96SB4 655 aaKnown RBP19.19■□□□□ 0.66
PSPC1-203ENST00000471658 VPS37BQ9H9H4 285 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 USP36Q9P275 1121 aaKnown RBP19.19■□□□□ 0.66
PSPC1-203ENST00000471658 CYP8B1Q9UNU6 501 aa19.19■□□□□ 0.66
PSPC1-203ENST00000471658 FNDC3AQ9Y2H6 1198 aaKnown RBP19.19■□□□□ 0.66
PSPC1-203ENST00000471658 STX7O15400 261 aaKnown RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 PLRG1O43660 514 aaKnown RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 AP1G1O43747 822 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 PIAS1O75925 651 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 PCDH8O95206 1070 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 POLBP06746 335 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 ACSL1P33121 698 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 MAGEA9P43362 315 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 STC1P52823 247 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 ADPRHP54922 357 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 DMWDQ09019 674 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 TRMT10CQ7L0Y3 403 aaKnown RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 HNRNPLLQ8WVV9 542 aaKnown RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 HDAC10Q969S8 669 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 NAT9Q9BTE0 207 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 NLE1Q9NVX2 485 aaPredicted RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 CD84Q9UIB8 345 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 FKBPLQ9UIM3 349 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 FAM169AQ9Y6X4 670 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 FAM47DPA6NHR8 397 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 GOLGA8KD6RF30 607 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 GOLGA8TH3BQL2 631 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 RIPK2O43353 540 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 PAPSS2O95340 614 aaPredicted RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 ELFN1P0C7U0 828 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 BPIP17213 487 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 NFKBIAP25963 317 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 HSD17B3P37058 310 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 ETV3P41162 512 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 CCR3P51677 355 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 SPANXN3Q5MJ09 141 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 Q6ZVL8 140 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 KBTBD6Q86V97 674 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 CCNJLQ8IV13 435 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 FAM160A2Q8N612 972 aaPredicted RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 PNPLA1Q8N8W4 532 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 CXorf40AQ8TE69 158 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 UBLCP1Q8WVY7 318 aaPredicted RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 CDKN2AIPNLQ96HQ2 116 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 IER2Q9BTL4 223 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 FZD4Q9ULV1 537 aa19.18■□□□□ 0.66
PSPC1-203ENST00000471658 ZFR2Q9UPR6 939 aaKnown RBP19.18■□□□□ 0.66
PSPC1-203ENST00000471658 INVSQ9Y283 1065 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms