RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 THBS1P07996 1170 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 HOXC4P09017 264 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-211ENST00000471455 ELFN1P0C7U0 828 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 FAM87AP0C7U9 286 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 GPD1P21695 349 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 EEF1GP26641 437 aaKnown RBP9.16□□□□□ -0.94
CPSF4-211ENST00000471455 ERCC5P28715 1186 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-211ENST00000471455 STAT1P42224 750 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 HDAC4P56524 1084 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 GSCP56915 257 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-211ENST00000471455 UBE2HP62256 183 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 ILF3Q12906 894 aaKnown RBP eCLIP9.16□□□□□ -0.94
CPSF4-211ENST00000471455 SERINC3Q13530 473 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 TCEA2Q15560 299 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 TGIF1Q15583 401 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 CAMK4Q16566 473 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 MIIPQ5JXC2 388 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 FAM72AQ5TYM5 149 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 FAM72DQ6L9T8 149 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 OGFOD3Q6PK18 319 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 PIM3Q86V86 326 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 FAM72BQ86X60 149 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 ZNF295-AS1Q8N0V1 137 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 UMODL1-AS1Q8N2C9 162 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 CCDC185Q8N715 623 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 GPT2Q8TD30 523 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 USP7Q93009 1102 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 EXOC2Q96KP1 924 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 DPYSL5Q9BPU6 564 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 NAA15Q9BXJ9 866 aaKnown RBP9.16□□□□□ -0.94
CPSF4-211ENST00000471455 GSDMCQ9BYG8 508 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 TRIM4Q9C037 500 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 SLC25A18Q9H1K4 315 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 WDR26Q9H7D7 661 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 ADAM22Q9P0K1 906 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 LRIT1Q9P2V4 623 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 LHX3Q9UBR4 397 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 COQ6Q9Y2Z9 468 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 RNF215Q9Y6U7 377 aa9.16□□□□□ -0.94
CPSF4-211ENST00000471455 A0A1W2PQ67 120 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 FAM170AA1A519 330 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 ARHGAP42A6NI28 874 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 RHPN2P1A8MT19 583 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 EIF3CLB5ME19 914 aaKnown RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 SUV39H1O43463 412 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 CREB3O43889 395 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 GADD45BO75293 160 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 GFPT2O94808 682 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 NTRK1P04629 796 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 ITIH2P19823 946 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 ITIH1P19827 911 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 CSNK1DP48730 415 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 NDST2P52849 883 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 GDF10P55107 478 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 TPI1P60174 286 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 TRA2AQ13595 282 aaKnown RBP eCLIP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 HLTFQ14527 1009 aaKnown RBP eCLIP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 TBR1Q16650 682 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 FKBP15Q5T1M5 1219 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 DNAJC24Q6P3W2 148 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 SCYL2Q6P3W7 929 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 BORAQ6PGQ7 559 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 VASH2Q86V25 355 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 ZFAND4Q86XD8 727 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 DTX1Q86Y01 620 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 SLITRK4Q8IW52 837 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 DEPDC4Q8N2C3 294 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 VWA5B2Q8N398 1253 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 C3orf20Q8ND61 904 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 JOSD2Q8TAC2 188 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 OR1E3Q8WZA6 343 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 VOPP1Q96AW1 172 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 EIF3CQ99613 913 aaKnown RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 CINPQ9BW66 212 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 FGF22Q9HCT0 170 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 PHPT1Q9NRX4 125 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 GEMIN8Q9NWZ8 242 aaKnown RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 FOXJ2Q9P0K8 574 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 MOSPD1Q9UJG1 213 aa9.15□□□□□ -0.94
CPSF4-211ENST00000471455 NOCTQ9UK39 431 aaKnown RBP9.15□□□□□ -0.94
CPSF4-211ENST00000471455 SCN8AQ9UQD0 1980 aa9.15□□□□□ -0.95
CPSF4-211ENST00000471455 LRP4O75096 1905 aa9.15□□□□□ -0.95
CPSF4-211ENST00000471455 CASC3O15234 703 aaKnown RBP9.14□□□□□ -0.95
CPSF4-211ENST00000471455 INSIG1O15503 277 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 PRAMEF11O60813 436 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 RECQL5O94762 991 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-211ENST00000471455 MYCLP1P12525 358 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-211ENST00000471455 ITGB6P18564 788 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 MAN1A1P33908 653 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 RFC1P35251 1148 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-211ENST00000471455 SOX5P35711 763 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 NOP2P46087 812 aaKnown RBP9.14□□□□□ -0.95
CPSF4-211ENST00000471455 GPR3P46089 330 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 ZNF143P52747 638 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-211ENST00000471455 AP1S1P61966 158 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 FMO1Q01740 532 aa9.14□□□□□ -0.95
CPSF4-211ENST00000471455 BCL2L1Q07817 233 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms