RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 UGT2B4P06133 528 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 C2P06681 752 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 PMLP29590 882 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 SERPINB4P48594 390 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 VASPP50552 380 aaPredicted RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 CLCN5P51795 746 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 KDSRQ06136 332 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 RUNX3Q13761 415 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 CTC1Q2NKJ3 1217 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 TAF1BQ53T94 588 aaPredicted RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 ZNF789Q5FWF6 425 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 CCDC63Q8NA47 563 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 FRS2Q8WU20 508 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 ELSPBP1Q96BH3 223 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 FKBPLQ9UIM3 349 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 CDH23Q9H251 3354 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 CAPN8A6NHC0 703 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 WASH3PC4AMC7 463 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 STMN1P16949 149 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 PSMC3P17980 439 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 OGNP20774 298 aaKnown RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 HNF1BP35680 557 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 POU4F1Q01851 419 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 ILF2Q12905 390 aaKnown RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 PTPRNQ16849 979 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 N4BP2L1Q5TBK1 243 aaPredicted RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 GDPD4Q6W3E5 623 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 ZSWIM9Q86XI8 627 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 PNPLA1Q8N8W4 532 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 TTC8Q8TAM2 541 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 GRIN3AQ8TCU5 1115 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 ZNF75CPQ92670 426 aaPredicted RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 ECHDC3Q96DC8 303 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 HEPHQ9BQS7 1158 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 PRO3102Q9H379 93 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 ZFYVE1Q9HBF4 777 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 ANKRD6Q9Y2G4 727 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 FNDC3AQ9Y2H6 1198 aaKnown RBP18.98■□□□□ 0.63
SMC4-209ENST00000468653 MTCH2Q9Y6C9 303 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 C1orf232A0A0U1RR37 186 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 A0A1W2PQ67 120 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 PHGDHO43175 533 aaKnown RBP18.97■□□□□ 0.63
SMC4-209ENST00000468653 GSTA1P08263 222 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 BMP1P13497 986 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 CRABP2P29373 138 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 HMGCLP35914 325 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 RAB10P61026 200 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 ZKSCAN8Q15776 578 aaPredicted RBP18.97■□□□□ 0.63
SMC4-209ENST00000468653 C16orf46Q6P387 395 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 PARM1Q6UWI2 310 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 USP45Q70EL2 814 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 NXPE3Q969Y0 559 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 VOPP1Q96AW1 172 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 TSNARE1Q96NA8 513 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 POMKQ9H5K3 350 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 FGFR1OP2Q9NVK5 253 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 IL17CQ9P0M4 197 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 DOCK8Q8NF50 2099 aa18.97■□□□□ 0.63
SMC4-209ENST00000468653 PRRT4C9JH25 899 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 MC4RP32245 332 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 GMPRP36959 345 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 TAS2R39P59534 338 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 IRX4P78413 519 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 IRF9Q00978 393 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 MESP2Q0VG99 397 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 SEMA3AQ14563 771 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 KLHL32Q96NJ5 620 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 NDNQ99608 321 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 OMDQ99983 421 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 GTSE1Q9NYZ3 720 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 CRYL1Q9Y2S2 319 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 H7C0S8 307 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 GDI1P31150 447 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 STC1P52823 247 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 EIF4HQ15056 248 aaKnown RBP18.96■□□□□ 0.63
SMC4-209ENST00000468653 ZSCAN26Q16670 478 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 TYSND1Q2T9J0 566 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 FNDC3BQ53EP0 1204 aaKnown RBP18.96■□□□□ 0.63
SMC4-209ENST00000468653 ZRANB3Q5FWF4 1079 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 RBM20Q5T481 1227 aaKnown RBP18.96■□□□□ 0.63
SMC4-209ENST00000468653 FGF14Q92915 247 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 SCRN2Q96FV2 425 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 TSPAN17Q96FV3 270 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 MANSC1Q9H8J5 431 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 TMEM216Q9P0N5 145 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 EMCNQ9ULC0 261 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 ACOT9Q9Y305 439 aa18.96■□□□□ 0.63
SMC4-209ENST00000468653 A8MX80 341 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 PLIN3O60664 434 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 NDUFS3O75489 264 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 CLDN7O95471 211 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 PRSS56P0CW18 603 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 IGFBP4P22692 258 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 GJA4P35212 333 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 LTBRP36941 435 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 CSRP3P50461 194 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 POLR2LP62875 67 aaKnown RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 GRIN2CQ14957 1233 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 CCDC153Q494R4 210 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms