RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 HES3Q5TGS1 186 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 LRRC66Q68CR7 880 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 ALG1LQ6GMV1 187 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 C11orf63Q6NUN7 778 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 TMPRSS12Q86WS5 348 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 VSIG1Q86XK7 387 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 RCOR2Q8IZ40 523 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 NDUFAF2Q8N183 169 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 KDF1Q8NAX2 398 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-205ENST00000468143 OR56A4Q8NGH8 313 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 MDM1Q8TC05 714 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 ZCCHC14Q8WYQ9 949 aaKnown RBP11.55□□□□□ -0.56
CDHR3-205ENST00000468143 OR1E3Q8WZA6 343 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 HAUS1Q96CS2 278 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 PDXPQ96GD0 296 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 WDR92Q96MX6 357 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 OLFM3Q96PB7 478 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 MCCC1Q96RQ3 725 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-205ENST00000468143 RBM15Q96T37 977 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDHR3-205ENST00000468143 DUSP23Q9BVJ7 150 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 HEMGNQ9BXL5 484 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 PCDH9Q9HC56 1237 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 FGF22Q9HCT0 170 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 HAUS2Q9NVX0 235 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 GULP1Q9UBP9 304 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 AMACRQ9UHK6 382 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 PPIL1Q9Y3C6 166 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 U3KQA8 63 aa11.55□□□□□ -0.56
CDHR3-205ENST00000468143 TP53BP1Q12888 1972 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-205ENST00000468143 hCG_1818297A0A087WSY0 165 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 A0A0J9YYE9 177 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 A0A0U1RQJ8 604 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 PPP1R12AO14974 1030 aaPredicted RBP11.54□□□□□ -0.56
CDHR3-205ENST00000468143 CLDN7O95471 211 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TRBC1P01850 177 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TRIM23P36406 574 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 BLKP51451 505 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 INSM1Q01101 510 aaPredicted RBP11.54□□□□□ -0.56
CDHR3-205ENST00000468143 ILKQ13418 452 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TFDP2Q14188 446 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 GALNT3Q14435 633 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 PCSK7Q16549 785 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TAZQ16635 292 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TFDP3Q5H9I0 405 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 RAET1GQ6H3X3 334 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 ESRP1Q6NXG1 681 aaKnown RBP11.54□□□□□ -0.56
CDHR3-205ENST00000468143 ZCCHC8Q6NZY4 707 aaKnown RBP11.54□□□□□ -0.56
CDHR3-205ENST00000468143 GUSBP11Q6P575 273 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TECPR1Q7Z6L1 1165 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 KIAA1328Q86T90 577 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 ZC3H18Q86VM9 953 aaKnown RBP11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TMEM139Q8IV31 216 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 KATNAL2Q8IYT4 538 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 FAM181AQ8N9Y4 354 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 IFI44Q8TCB0 444 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 SCAMP4Q969E2 229 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 DTD2Q96FN9 168 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 DESI2Q9BSY9 194 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 ABCG8Q9H221 673 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 WDR26Q9H7D7 661 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 C10orf88Q9H8K7 445 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 CYP4F12Q9HCS2 524 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 SIRPGQ9P1W8 387 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 TRIM10Q9UDY6 481 aa11.54□□□□□ -0.56
CDHR3-205ENST00000468143 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDHR3-205ENST00000468143 COL5A1P20908 1838 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CAPN8A6NHC0 703 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 LMO7DNF2Z398 122 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 PSMD11O00231 422 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 TAF4O00268 1085 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 TPP1O14773 563 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CASC3O15234 703 aaKnown RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 MT-CO3P00414 261 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CDK4P11802 303 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CA4P22748 312 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 POLD2P49005 469 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 DUSP3P51452 185 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 VAV2P52735 878 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 KIAA1024LP59773 190 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 E2F1Q01094 437 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CYP4F3Q08477 520 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 ELOCQ15369 112 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 NR0B2Q15466 257 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 QPCTQ16769 361 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 AADACL2Q6P093 401 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 EFL1Q7Z2Z2 1120 aaKnown RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 NT5DC3Q86UY8 548 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 HEATR4Q86WZ0 1026 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 SLC35F3Q8IY50 421 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 ATL2Q8NHH9 583 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 EXD1Q8NHP7 514 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 SPATA22Q8NHS9 363 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CCL4L1Q8NHW4 92 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 TFB1MQ8WVM0 346 aaKnown RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 P3H4Q92791 437 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms