RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 BHMG1C9JSJ3 638 aaPredicted RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 TP73O15350 636 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 HRO43593 1189 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 FSBPO95073 299 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 CLDN7O95471 211 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 SLC4A1P02730 911 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 RHOXF2BP0C7M4 288 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ADRA1DP25100 572 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 MAGEA3P43357 314 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ARL4CP56559 192 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 CREB5Q02930 508 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PTSQ03393 145 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 SRSF5Q13243 272 aaKnown RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ACOX1Q15067 660 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ELF2Q15723 593 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 HIF1AQ16665 826 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 SETMARQ53H47 684 aaPredicted RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 DNAJC21Q5F1R6 531 aaKnown RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 CERCAMQ5T4B2 595 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ZDHHC20Q5W0Z9 365 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 DENND2CQ68D51 928 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 CEP68Q76N32 757 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 HSD11B1LQ7Z5J1 315 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PDIK1LQ8N165 341 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 TTC30BQ8N4P2 665 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PPHLN1Q8NEY8 458 aaKnown RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PTCD2Q8WV60 388 aaKnown RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ART4Q93070 314 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 BIRC7Q96CA5 298 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 COQ10AQ96MF6 247 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 RHOXF2Q9BQY4 288 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 C1QTNF2Q9BXJ5 285 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 SLC17A9Q9BYT1 436 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 CDH19Q9H159 772 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 RRAGDQ9NQL2 400 aaPredicted RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 RAD18Q9NS91 495 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PKD2L2Q9NZM6 624 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 ZFR2Q9UPR6 939 aaKnown RBP15.21■□□□□ 0.03
SNIP1-202ENST00000468040 DMTF1Q9Y222 760 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 PKP3Q9Y446 797 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 SDR42E2A6NKP2 422 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 MEI4A8MW99 385 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 WNT9AO14904 365 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 AURKAO14965 403 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 LDB2O43679 373 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 RECQL5O94762 991 aaPredicted RBP15.2■□□□□ 0.02
SNIP1-202ENST00000468040 RHOBTB1O94844 696 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 IGHV4-34P06331 123 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 C1SP09871 688 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 LPOP22079 712 aaPredicted RBP15.2■□□□□ 0.02
SNIP1-202ENST00000468040 MGAT1P26572 445 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 MAT2AP31153 395 aaKnown RBP15.2■□□□□ 0.02
SNIP1-202ENST00000468040 SPINT3P49223 89 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 PLTPP55058 493 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 CUL1Q13616 776 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 SEPT6Q14141 434 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 SIM2Q14190 667 aaPredicted RBP15.2■□□□□ 0.02
SNIP1-202ENST00000468040 AGERQ15109 404 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 PCID2Q5JVF3 399 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 PMS2CLQ68D20 193 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 NLRP9Q7RTR0 991 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 CYP2U1Q7Z449 544 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 TMEFF1Q8IYR6 380 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 NRSN1Q8IZ57 195 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 CBARPQ8N350 705 aaPredicted RBP15.2■□□□□ 0.02
SNIP1-202ENST00000468040 ZC3H10Q96K80 434 aaKnown RBP15.2■□□□□ 0.02
SNIP1-202ENST00000468040 HSPA12BQ96MM6 686 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 HINFPQ9BQA5 517 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 FOXP3Q9BZS1 431 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 SAMD15Q9P1V8 674 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 TCAF1Q9Y4C2 921 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 ARL5AQ9Y689 179 aa15.2■□□□□ 0.02
SNIP1-202ENST00000468040 NUMA1Q14980 2115 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 A0A0U1RQS6 177 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 MAGEB16A2A368 324 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 MROH6A6NGR9 719 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 STX7O15400 261 aaKnown RBP15.19■□□□□ 0.02
SNIP1-202ENST00000468040 AVILO75366 819 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 PAK4O96013 591 aaPredicted RBP15.19■□□□□ 0.02
SNIP1-202ENST00000468040 HNRNPA2B1P22626 353 aaKnown RBP15.19■□□□□ 0.02
SNIP1-202ENST00000468040 MTM1Q13496 603 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 PLK5Q496M5 336 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 WDR45BQ5MNZ6 344 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 CASC4Q6P4E1 433 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 ZDHHC24Q6UX98 284 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 Q6ZVL8 140 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 ZNF765Q7L2R6 523 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 DENND6BQ8NEG7 585 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 FBXO25Q8TCJ0 367 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 STYXQ8WUJ0 223 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 SNX19Q92543 992 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 UBXN4Q92575 508 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 RUBCNQ92622 972 aa15.19■□□□□ 0.02
SNIP1-202ENST00000468040 PEX13Q92968 403 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms