RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 LSMEM2Q8N112 164 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 CBARPQ8N350 705 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-207ENST00000467985 OR6C4Q8NGE1 309 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 ANP32BQ92688 251 aaKnown RBP19.1■□□□□ 0.65
COL7A1-207ENST00000467985 PDXPQ96GD0 296 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 CHP1Q99653 195 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 PHPT1Q9NRX4 125 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-207ENST00000467985 SPTLC3Q9NUV7 552 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 RBM22Q9NW64 420 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL7A1-207ENST00000467985 DNPEPQ9ULA0 475 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 GPR34Q9UPC5 381 aa19.1■□□□□ 0.65
COL7A1-207ENST00000467985 TMEM202A6NGA9 273 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 NPIPB15A6NHN6 443 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 AKR1B15C9JRZ8 316 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 RRP8O43159 456 aaKnown RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 BRINP1O60477 761 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 CELA2BP08218 269 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 MYCLP1P12525 358 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 TGM2P21980 687 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 TEAD1P28347 426 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 ZNF75DP51815 510 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 C19orf48Q6RUI8 117 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 RBM44Q6ZP01 1051 aaKnown RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 PQLC3Q8N755 202 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 SNIP1Q8TAD8 396 aaKnown RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 HNRNPLLQ8WVV9 542 aaKnown RBP19.09■□□□□ 0.65
COL7A1-207ENST00000467985 PIH1D2Q8WWB5 315 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 OR1E3Q8WZA6 343 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 FGF11Q92914 225 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 HDAC11Q96DB2 347 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 DTD2Q96FN9 168 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 RNF157Q96PX1 679 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 FGF22Q9HCT0 170 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 GULP1Q9UBP9 304 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 INTUQ9ULD6 942 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 PCDHB1Q9Y5F3 818 aa19.09■□□□□ 0.65
COL7A1-207ENST00000467985 BPTFQ12830 3046 aa19.08■□□□□ 0.65
COL7A1-207ENST00000467985 LRRD1A4D1F6 860 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 FZD6O60353 706 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 USP12O75317 370 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 LHCGRP22888 699 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 ETV3P41162 512 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 EPHB1P54762 984 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 RPL26P61254 145 aaKnown RBP19.08■□□□□ 0.64
COL7A1-207ENST00000467985 GBE1Q04446 702 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 ISXQ2M1V0 245 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 COL28A1Q2UY09 1125 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 ODF2Q5BJF6 829 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 PERM1Q5SV97 790 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 LRRC38Q5VT99 294 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 DENND2CQ68D51 928 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 LRRC69Q6ZNQ3 347 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 CCNYQ8ND76 341 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 RAPGEF5Q92565 580 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 TEX101Q9BY14 249 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 POLR1BQ9H9Y6 1135 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 DTLQ9NZJ0 730 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 RALYQ9UKM9 306 aaKnown RBP19.08■□□□□ 0.64
COL7A1-207ENST00000467985 RPL26L1Q9UNX3 145 aaKnown RBP19.08■□□□□ 0.64
COL7A1-207ENST00000467985 TTLL3Q9Y4R7 772 aa19.08■□□□□ 0.64
COL7A1-207ENST00000467985 MAP3K6O95382 1288 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 PDHA1P08559 390 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 ZFXP17010 805 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 ZNF30P17039 623 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 EIF2S3P41091 472 aaKnown RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 SLC1A1P43005 524 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 LSSP48449 732 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 DPTQ07507 201 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 TBX2Q13207 712 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 TCEAL1Q15170 157 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 TBC1D25Q3MII6 688 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 HSD11B1LQ7Z5J1 315 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 TAF8Q7Z7C8 310 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 RAVER1Q8IY67 606 aaKnown RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 CCDC13Q8IYE1 715 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 KYQ8NBH2 561 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 ZNF578Q96N58 590 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 DCBLD2Q96PD2 775 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 CCDC3Q9BQI4 270 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 LGR4Q9BXB1 951 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 MAK16Q9BXY0 300 aaKnown RBP19.07■□□□□ 0.64
COL7A1-207ENST00000467985 CYP4F12Q9HCS2 524 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 SIRPGQ9P1W8 387 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 RP1P56715 2156 aa19.07■□□□□ 0.64
COL7A1-207ENST00000467985 CACNA1GO43497 2377 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 A0A0J9YYE9 177 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 PRSS38A1L453 326 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 DXOO77932 396 aaKnown RBP19.06■□□□□ 0.64
COL7A1-207ENST00000467985 TRBC1P01850 177 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 PYGLP06737 847 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 CTPS1P17812 591 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 ABCG1P45844 678 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 DSC2Q02487 901 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 SLC10A2Q12908 348 aaPredicted RBP19.06■□□□□ 0.64
COL7A1-207ENST00000467985 SPIDRQ14159 915 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 TCEA2Q15560 299 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 Q6ZVL8 140 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 TSPAN33Q86UF1 283 aa19.06■□□□□ 0.64
COL7A1-207ENST00000467985 HEATR4Q86WZ0 1026 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms