RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 RECQL5O94762 991 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 TMCC1O94876 653 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 LETM1O95202 739 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 NDUFA10O95299 355 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 YEATS4O95619 227 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 RECKO95980 971 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 HOXC4P09017 264 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 CCNYL3P0C7X3 344 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 MYCLP1P12525 358 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 KRT5P13647 590 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 GARSP41250 739 aaKnown RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 ACTR1BP42025 376 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 ITGA1P56199 1179 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 ACTR1AP61163 376 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 RHOAP61586 193 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 DEUP1Q05D60 604 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 MEA1Q16626 185 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 UGP2Q16851 508 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 WDR74Q6RFH5 385 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 FAM183BPQ6ZVS7 135 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 RRAGAQ7L523 313 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 ZNF354CQ86Y25 554 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 HPS6Q86YV9 775 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 RBMXL3Q8N7X1 1067 aaKnown RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 CT55Q8WUE5 264 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 ZNF396Q96N95 335 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 RANBP9Q96S59 729 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 TTYH3Q9C0H2 523 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 ING2Q9H160 280 aa10.23□□□□□ -0.77
HDAC3-203ENST00000467533 TRNAU1APQ9NX07 287 aaKnown RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 SIDT1Q9NXL6 827 aaKnown RBP10.23□□□□□ -0.77
HDAC3-203ENST00000467533 C21orf140B9A014 251 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 LRRTM2O43300 516 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 THAP12O43422 761 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 ZG16O60844 167 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 ELFN1P0C7U0 828 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-203ENST00000467533 PTGER4P35408 488 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 CXCR3P49682 368 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 RPS18P62269 152 aaKnown RBP10.22□□□□□ -0.77
HDAC3-203ENST00000467533 CTBSQ01459 385 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 PTK2Q05397 1052 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 UGT8Q16880 541 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 ACBD5Q5T8D3 534 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-203ENST00000467533 RESP18Q5W5W9 173 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 CISD2Q8N5K1 135 aaKnown RBP10.22□□□□□ -0.77
HDAC3-203ENST00000467533 NETO2Q8NC67 525 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 SLC37A2Q8TED4 501 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 ELMO2Q96JJ3 720 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 EXOC2Q96KP1 924 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 C1orf74Q96LT6 269 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 CPXM1Q96SM3 734 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 METTL14Q9HCE5 456 aaKnown RBP10.22□□□□□ -0.77
HDAC3-203ENST00000467533 PHPT1Q9NRX4 125 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-203ENST00000467533 STAP1Q9ULZ2 295 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 SUFUQ9UMX1 484 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 ATP8A1Q9Y2Q0 1164 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
HDAC3-203ENST00000467533 SVILO95425 2214 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 TRBV23OR9-2A0A075B6M9 112 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 RASA4BC9J798 803 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.77
HDAC3-203ENST00000467533 INSIG1O15503 277 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 RASA4O43374 803 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 BUB1O43683 1085 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 MAP3K6O95382 1288 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 ITGA3P26006 1051 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 ERCC5P28715 1186 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-203ENST00000467533 GNA15P30679 374 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 CLCN1P35523 988 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 TRIM23P36406 574 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 PTGIRP43119 386 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 FASLGP48023 281 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 ME1P48163 572 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 PNCKQ6P2M8 343 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 OLFML1Q6UWY5 402 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 C11orf57Q6ZUT1 292 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-203ENST00000467533 ARHGEF19Q8IW93 802 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 MMP21Q8N119 569 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 PELI3Q8N2H9 469 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 FDCSPQ8NFU4 85 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 OR6C1Q96RD1 312 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 RUFY1Q96T51 708 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 NPY6RQ99463 290 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 NUDT9Q9BW91 350 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 STN1Q9H668 368 aaKnown RBP10.21□□□□□ -0.77
HDAC3-203ENST00000467533 LHX9Q9NQ69 397 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 NDFIP2Q9NV92 336 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 DNAI1Q9UI46 699 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 PADI1Q9ULC6 663 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 MTMR6Q9Y217 621 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 MFHAS1Q9Y4C4 1052 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 ST14Q9Y5Y6 855 aa10.21□□□□□ -0.77
HDAC3-203ENST00000467533 TACC2O95359 2948 aa10.2□□□□□ -0.78
HDAC3-203ENST00000467533 TSPAN11A1L157 253 aa10.2□□□□□ -0.78
HDAC3-203ENST00000467533 BUB1BO60566 1050 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-203ENST00000467533 RAMP2O60895 175 aa10.2□□□□□ -0.78
HDAC3-203ENST00000467533 F9P00740 461 aa10.2□□□□□ -0.78
HDAC3-203ENST00000467533 MT-ND3P03897 115 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms