RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ALG9Q9H6U8 611 aa13.02□□□□□ -0.33
PDZRN3-205ENST00000466780 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
PDZRN3-205ENST00000466780 CACNG4Q9UBN1 327 aa13.02□□□□□ -0.33
PDZRN3-205ENST00000466780 TRIM64BA6NI03 449 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 PPP6CO00743 305 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 CLOCKO15516 846 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 MAFKO60675 156 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 RASAL1O95294 804 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 HLA-DQB2P05538 268 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 PAMP19021 973 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 IL10P22301 178 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 SLC6A2P23975 617 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 PSMD7P51665 324 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 KIF19Q2TAC6 998 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 HECTD2Q5U5R9 776 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 IL31Q6EBC2 164 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 KIAA0408Q6ZU52 694 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 SLC22A9Q8IVM8 553 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 MINDY1Q8N5J2 469 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ZBTB8BQ8NAP8 495 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ZNF420Q8TAQ5 688 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 TMEM40Q8WWA1 233 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 HDAC10Q969S8 669 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 THAP11Q96EK4 314 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 L3HYPDHQ96EM0 354 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 HOPXQ9BPY8 73 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 MROH8Q9H579 483 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 SOX17Q9H6I2 414 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 TBC1D13Q9NVG8 400 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ACTR3BQ9P1U1 418 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 DNAJC15Q9Y5T4 150 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 MYBPHLA2RUH7 354 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 EI24O14681 340 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ARPC2O15144 300 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 WISP3O95389 354 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 F9P00740 461 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 DARSP14868 501 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 PSMA4P25789 261 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 LEPRP48357 1165 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 GEMP55040 296 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 SH3BP2P78314 561 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 GRB7Q14451 532 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ZNF829Q3KNS6 432 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 UBXN11Q5T124 520 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 CHST15Q7LFX5 561 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ISCA2Q86U28 154 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 BORCS5Q969J3 196 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 TRMOQ9BU70 441 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 TRIM15Q9C019 465 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 ENTPD7Q9NQZ7 604 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 TBC1D23Q9NUY8 699 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 DSEQ9UL01 958 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 PIN4Q9Y237 131 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 NDUFAF1Q9Y375 327 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 FADS3Q9Y5Q0 445 aa13.01□□□□□ -0.33
PDZRN3-205ENST00000466780 FAM163BP0C2L3 166 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 CLCN5P51795 746 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 ZNF135P52742 658 aaPredicted RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 CDKN2DP55273 166 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 BNIP2Q12982 314 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 TGFBIQ15582 683 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 CYBRD1Q53TN4 286 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 GPR158Q5T848 1215 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 LDB1Q86U70 411 aaPredicted RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 PHYKPLQ8IUZ5 450 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 TRPV3Q8NET8 790 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 EMID1Q96A84 441 aaPredicted RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 PCED1BQ96HM7 432 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 FSD1LQ9BXM9 530 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 SLC39A8Q9C0K1 460 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 SIK2Q9H0K1 926 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 NDFIP2Q9NV92 336 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 MATN3O15232 486 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 XPOTO43592 962 aaKnown RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 CBFA2T3O75081 653 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 MTHFD1P11586 935 aaKnown RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 GFAPP14136 432 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 YAP1P46937 504 aaKnown RBP13□□□□□ -0.33
PDZRN3-205ENST00000466780 CCR3P51677 355 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 APLP1P51693 650 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 FOXA1P55317 472 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 BNIP3Q12983 259 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 SLC44A4Q53GD3 710 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 KCTD8Q6ZWB6 473 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 PIM3Q86V86 326 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 PTERQ96BW5 349 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 PLEKHA8Q96JA3 519 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 SEZ6LQ9BYH1 1024 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 CD320Q9NPF0 282 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 SLC52A3Q9NQ40 469 aa13□□□□□ -0.33
PDZRN3-205ENST00000466780 LRRC14BA6NHZ5 514 aa12.99□□□□□ -0.33
PDZRN3-205ENST00000466780 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-205ENST00000466780 CAPGP40121 348 aa12.99□□□□□ -0.33
PDZRN3-205ENST00000466780 MAGEA10P43363 369 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms