RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 PRAMEP78395 509 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 EPS8Q12929 822 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 ITGADQ13349 1161 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 NAE1Q13564 534 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 JADE1Q6IE81 842 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 ANKRD54Q6NXT1 300 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 PARM1Q6UWI2 310 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 SEPT14Q6ZU15 432 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 BEST2Q8NFU1 509 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 TASP1Q9H6P5 420 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 SIRT3Q9NTG7 399 aaPredicted RBP4.82□□□□□ -1.64
USP25-207ENST00000464435 DECR2Q9NUI1 292 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 MTMR6Q9Y217 621 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 TMEM5Q9Y2B1 443 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 CEPT1Q9Y6K0 416 aa4.82□□□□□ -1.64
USP25-207ENST00000464435 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 P4HA2O15460 535 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 HCRTR2O43614 444 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 NDUFS3O75489 264 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 SLC25A12O75746 678 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 FTCDO95954 541 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TOMM40O96008 361 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 PSG1P11464 419 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TBXAS1P24557 533 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 EIF2DP41214 584 aaKnown RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 RFX5P48382 616 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 ALDH7A1P49419 539 aaKnown RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 GALCP54803 685 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 IFI35P80217 286 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 STK4Q13043 487 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TRAF1Q13077 416 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 SHBQ15464 509 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 USP41Q3LFD5 358 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 MANEAQ5SRI9 462 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 PLEKHS1Q5SXH7 462 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 C6orf141Q5SZD1 244 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 CFAP77Q6ZQR2 320 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 Q6ZSV7 163 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 LINGO2Q7L985 606 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TICAM1Q8IUC6 712 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 LINC00346Q8IVM7 164 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TAGAPQ8N103 731 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TMEM199Q8N511 208 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 HJURPQ8NCD3 748 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 OR14L1PQ8NHC6 308 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 GABPB2Q8TAK5 448 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 SLC41A2Q96JW4 573 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 SLITRK1Q96PX8 696 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 FAM110AQ9BQ89 295 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TMEM47Q9BQJ4 181 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 ESRP2Q9H6T0 727 aaKnown RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 CLK4Q9HAZ1 481 aaKnown RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 PDE7BQ9NP56 450 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 SUCLA2Q9P2R7 463 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
USP25-207ENST00000464435 NENFQ9UMX5 172 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 NFE2L3Q9Y4A8 694 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 TTLL3Q9Y4R7 772 aa4.81□□□□□ -1.64
USP25-207ENST00000464435 IGLV5-39A0A0G2JS06 123 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 TMEM202A6NGA9 273 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 KDM4EB2RXH2 506 aaPredicted RBP4.8□□□□□ -1.64
USP25-207ENST00000464435 H0YGN5 161 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 H3BNX3 289 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 J3KR12 359 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 VCYO14598 125 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 ZC3H11AO75152 810 aaKnown RBP eCLIP4.8□□□□□ -1.64
USP25-207ENST00000464435 ENTPD3O75355 529 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 ERAL1O75616 437 aaKnown RBP4.8□□□□□ -1.64
USP25-207ENST00000464435 TPPPO94811 219 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 ADRB2P07550 413 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 GNLYP22749 145 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 MYF6P23409 242 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 CHATP28329 748 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 EIF2S3P41091 472 aaKnown RBP4.8□□□□□ -1.64
USP25-207ENST00000464435 PIK3CAP42336 1068 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 CAMPP49913 170 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 PMS2P54278 862 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 LINC00205P59089 165 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 MYBPC2Q14324 1141 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 GPR18Q14330 331 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 WASHC2DQ5SRD0 308 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 LRIF1Q5T3J3 769 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 DCAF12L2Q5VW00 463 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 PQLC2Q6ZP29 291 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 COLCA1Q6ZS62 124 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 MTSS1LQ765P7 747 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 TRAPPC11Q7Z392 1133 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 PATL1Q86TB9 770 aaKnown RBP4.8□□□□□ -1.64
USP25-207ENST00000464435 SCML4Q8N228 414 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 C7orf57Q8NEG2 295 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 IGSF8Q969P0 613 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 SLC25A28Q96A46 364 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 RRNAD1Q96FB5 475 aaKnown RBP4.8□□□□□ -1.64
USP25-207ENST00000464435 FEM1CQ96JP0 617 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 MARK4Q96L34 752 aa4.8□□□□□ -1.64
USP25-207ENST00000464435 GFM1Q96RP9 751 aaKnown RBP4.8□□□□□ -1.64
USP25-207ENST00000464435 SLF1Q9BQI6 1058 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms