RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PCDHGA1Q9Y5H4 931 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 NEMP2A6NFY4 417 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 BTNL10A8MVZ5 291 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 H3BM21 787 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 RFPL3O75679 317 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 TSHRP16473 764 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 ACP1P24666 158 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 HK3P52790 923 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 PPARDQ03181 441 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 LRRC66Q68CR7 880 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 ESRP1Q6NXG1 681 aaKnown RBP12.98□□□□□ -0.33
XRN1-203ENST00000463916 RD3Q7Z3Z2 195 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 HID1Q8IV36 788 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 EXD1Q8NHP7 514 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 HAUS1Q96CS2 278 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 DTD2Q96FN9 168 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 RBM15Q96T37 977 aaKnown RBP eCLIP12.98□□□□□ -0.33
XRN1-203ENST00000463916 PCDH9Q9HC56 1237 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 MRPL40Q9NQ50 206 aaKnown RBP12.98□□□□□ -0.33
XRN1-203ENST00000463916 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 CSNK1G3Q9Y6M4 447 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
XRN1-203ENST00000463916 GRID2IPA4D2P6 1211 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 PPP1R12AO14974 1030 aaPredicted RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 YY2O15391 372 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 CYP2A6P11509 494 aaPredicted RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 CTNNA1P35221 906 aaKnown RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 NR2C2P49116 596 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 NAP1L1P55209 391 aaKnown RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 SRP54P61011 504 aaKnown RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 TFDP2Q14188 446 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 USP45Q70EL2 814 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 TECPR1Q7Z6L1 1165 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 BTN2A2Q8WVV5 523 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 NUS1Q96E22 293 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 PDXPQ96GD0 296 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 ANP32EQ9BTT0 268 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 SLC13A1Q9BZW2 595 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 FGF22Q9HCT0 170 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 SPASTQ9UBP0 616 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 CD84Q9UIB8 345 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 LRP4O75096 1905 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 FUCA1P04066 466 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 CAPNS1P04632 268 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 PROS1P07225 676 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 C1SP09871 688 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 CKMT1AP12532 417 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 PTPN3P26045 913 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 HTR1BP28222 390 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 CDKN3Q16667 212 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 AADACL2Q6P093 401 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 FAM181AQ8N9Y4 354 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 LPCAT1Q8NF37 534 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 KIAA1524Q8TCG1 905 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 OR1E3Q8WZA6 343 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 ALG3Q92685 438 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 IMP4Q96G21 291 aaKnown RBP12.97□□□□□ -0.33
XRN1-203ENST00000463916 WDR92Q96MX6 357 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
XRN1-203ENST00000463916 KNTC1P50748 2209 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 LMO7DNF2Z398 122 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 CLDN7O95471 211 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.33
XRN1-203ENST00000463916 ALPPL2P10696 532 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 TGM2P21980 687 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 CD68P34810 354 aaPredicted RBP12.96□□□□□ -0.33
XRN1-203ENST00000463916 EPHB1P54762 984 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 DAB2P98082 770 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 CAMK2BQ13554 666 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 ARHGEF7Q14155 803 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 QPCTQ16769 361 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 ST3GAL2Q16842 350 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 TEX44Q53QW1 395 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 KIAA1328Q86T90 577 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
XRN1-203ENST00000463916 TFB1MQ8WVM0 346 aaKnown RBP12.96□□□□□ -0.33
XRN1-203ENST00000463916 P3H4Q92791 437 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 SCAMP4Q969E2 229 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 TADA1Q96BN2 335 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 TRIB3Q96RU7 358 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 DUSP23Q9BVJ7 150 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 WDR26Q9H7D7 661 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 C10orf88Q9H8K7 445 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 KLQ9UEF7 1012 aa12.96□□□□□ -0.33
XRN1-203ENST00000463916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
XRN1-203ENST00000463916 MACROD2A1Z1Q3 448 aa12.95□□□□□ -0.34
XRN1-203ENST00000463916 CAPN8A6NHC0 703 aa12.95□□□□□ -0.34
XRN1-203ENST00000463916 ANKRD66B4E2M5 251 aa12.95□□□□□ -0.34
XRN1-203ENST00000463916 PSMD11O00231 422 aa12.95□□□□□ -0.34
XRN1-203ENST00000463916 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
XRN1-203ENST00000463916 SOD1P00441 154 aa12.95□□□□□ -0.34
XRN1-203ENST00000463916 HOXC4P09017 264 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms