RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TMEM199Q8N511 208 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 BICD2Q8TD16 824 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 LPAR1Q92633 364 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 SLC22A18Q96BI1 424 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 MSI2Q96DH6 328 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 FAM110AQ9BQ89 295 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PCGF1Q9BSM1 259 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 TRMOQ9BU70 441 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PRSS22Q9GZN4 317 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 OSGEPL1Q9H4B0 414 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 KLHL31Q9H511 634 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 RABEP2Q9H5N1 569 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 CATSPERBQ9H7T0 1116 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 MAP6D1Q9H9H5 199 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 FZD3Q9NPG1 666 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.24□□□□□ -1.89
VCL-203ENST00000461383 TRNAU1APQ9NX07 287 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 ZHX1Q9UKY1 873 aaPredicted RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 SRPRBQ9Y5M8 271 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 ZMYM2Q9UBW7 1377 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 TTBK1Q5TCY1 1321 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 LOC100509620A0A075B734 347 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 hCG_1809904A0A1W2PP81 198 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 A0A1W2PPE2 198 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 A0A1W2PR64 198 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 GLOD5A6NK44 160 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 A6NL46 340 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 VCYO14598 125 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 OGG1O15527 345 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 ADAM20O43506 726 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 TLX3O43711 291 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 ITM2AO43736 263 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 JRKO75564 520 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 NDUFB8O95169 186 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 HIST1H2ABP04908 130 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 ADRB2P07550 413 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 ABCB1P08183 1280 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 ANXA7P20073 488 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 HIST1H2ADP20671 130 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 KELP23276 732 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 HOXA13P31271 388 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 CAPZA2P47755 286 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 LIG4P49917 911 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 NANOS3P60323 173 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 UBXN2AP68543 259 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 MRPS5P82675 430 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 MRPS34P82930 218 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 SRSF4Q08170 494 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 MTX1Q13505 466 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 KCNC3Q14003 757 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 GPR18Q14330 331 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 TRIP6Q15654 476 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 EZH2Q15910 746 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 PCGF3Q3KNV8 242 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 MMEL1Q495T6 779 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 Q4G0T1 1027 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 CDONQ4KMG0 1287 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 IGSF11Q5DX21 431 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SGO1Q5FBB7 561 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 Q5PR19 223 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 GARNL3Q5VVW2 1013 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SIGIRRQ6IA17 410 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SHC4Q6S5L8 630 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 MON1BQ7L1V2 547 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 HIST3H2AQ7L7L0 130 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 KBTBD6Q86V97 674 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 EPHX4Q8IUS5 362 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 LINC00346Q8IVM7 164 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 DSELQ8IZU8 1212 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SYT2Q8N9I0 419 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 TEX45Q8NA69 505 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 MIGA1Q8NAN2 632 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 AGBL3Q8NEM8 1001 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 OR8K5Q8NH50 307 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SNAPC3Q92966 411 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 ERGIC1Q969X5 290 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 ZG16BQ96DA0 208 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SLC41A2Q96JW4 573 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 GCNAQ96QF7 691 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 OR2A14Q96R47 310 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 GAD1Q99259 594 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 PAFAH2Q99487 392 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SEPT5Q99719 369 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 WDR77Q9BQA1 342 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 KIFC3Q9BVG8 833 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 ISCUQ9H1K1 167 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 CCDC177Q9NQR7 707 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 TMEM51Q9NW97 253 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 SEC63Q9UGP8 760 aaKnown RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 TTC7AQ9ULT0 858 aaPredicted RBP3.23□□□□□ -1.89
VCL-203ENST00000461383 ZNF711Q9Y462 761 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 CMAHPQ9Y471 501 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 COX11Q9Y6N1 276 aa3.23□□□□□ -1.89
VCL-203ENST00000461383 TAF1P21675 1872 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 A0A0G2JK05 382 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 TMEM272A0A1B0GTI8 110 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 A0A1W2PRQ8 180 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 OR2A25A4D2G3 310 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 MS4A18H0YCH9 400 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 MITFO75030 526 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms