RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SHCBP1LQ9BZQ2 653 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 NOP53Q9NZM5 478 aaKnown RBP20.24■□□□□ 0.83
CCM2-203ENST00000461377 DNMT3BQ9UBC3 853 aaKnown RBP20.24■□□□□ 0.83
CCM2-203ENST00000461377 VPS28Q9UK41 221 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 KIAA1671Q9BY89 1806 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 C2orf81A6NN90 581 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 PRSS56P0CW18 603 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 PMLP29590 882 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 CSKP41240 450 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 COPAP53621 1224 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 NAA25Q14CX7 972 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 GAREM2Q75VX8 874 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 TMC8Q8IU68 726 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 WFDC5Q8TCV5 224 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 LRRC3Q9BY71 257 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 WDR55Q9H6Y2 383 aaPredicted RBP20.23■□□□□ 0.83
CCM2-203ENST00000461377 VPS51Q9UID3 782 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 OBSL1O75147 1896 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 ANKRD66B4E2M5 251 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 DCXO43602 365 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 TM7SF2O76062 418 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 RAG1P15918 1043 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 LPOP22079 712 aaPredicted RBP20.23■□□□□ 0.83
CCM2-203ENST00000461377 MXRA7P84157 204 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 ISCA2Q86U28 154 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 SLC22A9Q8IVM8 553 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 TMEM199Q8N511 208 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 POU5F2Q8N7G0 328 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 DCAF4L2Q8NA75 395 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 MRPS31Q92665 395 aaKnown RBP20.23■□□□□ 0.83
CCM2-203ENST00000461377 CMTM5Q96DZ9 223 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 ZBED2Q9BTP6 218 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 CCDC28BQ9BUN5 200 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 NUF2Q9BZD4 464 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 CYP4F12Q9HCS2 524 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
CCM2-203ENST00000461377 GOLGA8QA0A0J9YX86 632 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 GOLGA8OA6NCC3 632 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 MEI4A8MW99 385 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 GOLGA8NF8WBI6 632 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 LMNAP02545 664 aaKnown RBP20.22■□□□□ 0.83
CCM2-203ENST00000461377 LINC00271P0C7V0 271 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 CD1DP15813 335 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 CDC25CP30307 473 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 KLF10Q13118 480 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 CDH18Q13634 790 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 KPNB1Q14974 876 aaKnown RBP20.22■□□□□ 0.83
CCM2-203ENST00000461377 LSM12Q3MHD2 195 aaKnown RBP20.22■□□□□ 0.83
CCM2-203ENST00000461377 RALGPS1Q5JS13 557 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 ACAD11Q709F0 780 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 HS6ST3Q8IZP7 471 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 LPGAT1Q92604 370 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 TCF12Q99081 682 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 OSBPL1AQ9BXW6 950 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 ALG9Q9H6U8 611 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
CCM2-203ENST00000461377 LSM7Q9UK45 103 aaKnown RBP20.22■□□□□ 0.83
CCM2-203ENST00000461377 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.22■□□□□ 0.83
CCM2-203ENST00000461377 F8W8V4 182 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 TPBGLP0DKB5 382 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 EPHA3P29320 983 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 CA8P35219 290 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 RHOAP61586 193 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 SLC7A9P82251 487 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 KHDC1Q4VXA5 237 aaKnown RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 LILRA6Q6PI73 481 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 SCUBE1Q8IWY4 988 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 TTC30BQ8N4P2 665 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 WDR60Q8WVS4 1066 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 PTERQ96BW5 349 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 CDYLQ9Y232 598 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 FCF1Q9Y324 198 aaKnown RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 NEMP1O14524 444 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 FZD6O60353 706 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 ANP32DO95626 131 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 PENKP01210 267 aaPredicted RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 JUNP05412 331 aaKnown RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 ZNF37AP17032 561 aaPredicted RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 SP100P23497 879 aaPredicted RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 KCNC1P48547 511 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 ACSBG2Q5FVE4 666 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 SH2D4BQ5SQS7 431 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 HTR3DQ70Z44 454 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 ULK2Q8IYT8 1036 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 CPXM2Q8N436 756 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 FAM161BQ96MY7 647 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 DCLRE1BQ9H816 532 aa20.21■□□□□ 0.83
CCM2-203ENST00000461377 POLR3BQ9NW08 1133 aaPredicted RBP20.21■□□□□ 0.83
CCM2-203ENST00000461377 TMEM233B4DJY2 109 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 LRG1P02750 347 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 HNRNPLP14866 589 aaKnown RBP eCLIP20.2■□□□□ 0.821e-7■□□□□ 10.3
CCM2-203ENST00000461377 GNAZP19086 355 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 ABL2P42684 1182 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 NFKB2Q00653 900 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 SULT2A1Q06520 285 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 GALNT1Q10472 559 aaPredicted RBP20.2■□□□□ 0.82
CCM2-203ENST00000461377 FRMD7Q6ZUT3 714 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 OTOP2Q7RTS6 562 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 MFN1Q8IWA4 741 aa20.2■□□□□ 0.82
CCM2-203ENST00000461377 CPSF7Q8N684 471 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms